哥伦比亚东北部美洲鳄梨的景观遗传学和植物地理学

Clara Inés Saldamando-Benjumea, Gloria Patricia Cañas-Gutiérrez, J. Muñoz, Rafael E Arango Isaza
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摘要

鳄梨(Persea americana)是世界上消费最多的水果之一。根据几个分子标记,本种可分为危地马拉、墨西哥和西印度三个主要人种。然而,该作物的基因型和表型性状之间的相互作用尚不清楚。为此,利用14颗微卫星对产自哥伦比亚东北部(Antioquia)的90棵criollo树进行了景观遗传学分析,对3个核位点、内切1-4- d葡聚糖酶(Cell)、查尔酮合成酶(CHS)和丝氨酸-苏氨酸激酶(STK)进行了测序,并对28个形态性状进行了分析。发现了高遗传多样性,表明criollo树的杂交起源。形态变异表现出混杂的种族特征。FST = 0.03, p =0.001(微卫星测量)表明遗传分化程度低。根据STRUCTURE,对于微卫星和串联核序列,K = 2。克里奥罗树与危地马拉和墨西哥人种一起被分配。预期杂合子数与海拔升高之间的Pearson相关性显著。Mantel检验低(r2 = 0.0097, p = 0.015),但显著表明距离隔离。嫁接在克里奥罗树和哈斯品种之间是可能的,因为两种鳄梨都是在相同的海拔高度内生产的。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Landscape Genetics and Phytogeography of Criollo Avocadoes Persea americana from Northeast Colombia
Avocado (Persea americana) Mill represents one of the most consumed fruits around the world. This species has been differentiated into three main races Guatemalan, Mexican and West Indian according to several molecular markers. However, the interaction between genotypic and phenotypic traits of this crop is still unknown. For this reason, a landscape genetics analysis was made in 90 criollo trees from Northeast Colombia (Antioquia) with 14 microsatellites, sequencing of 3 nuclear loci, endo-1-4-D-glucanase (Cell), Chalcone synthase (CHS) and serine-threonine-kinase (STK) and 28 morphological traits. High genetic diversity was found suggesting a hybrid origin of criollo trees. Morphological variation showed intermixed racial features. FST = 0.03, p =0.001 (measured with microsatellites) suggested low genetic differentiation. According to STRUCTURE, K = 2 for both microsatellites and concatenated nuclear sequences. Criollo trees were assigned together with the Guatemalan and Mexican races. Pearson correlation was significant between expected heterozygocities and elevation. Mantel test was low (r2 = 0.0097, p = 0.015) but significant demonstrating isolation by distance. Grafting is suitable between criollo trees and Hass variety is possible since both avocados are produced within the same altitudes.
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