用web2.0和Swift加速科学网关的开发

Wenjun Wu, T. Uram, M. Wilde, M. Hereld, M. Papka
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引用次数: 14

摘要

科学网关是一个计算门户网站,使科学家能够通过他们的web浏览器运行科学模拟、数据分析和可视化。在TeraGrid上构建科学网关的主要问题是如何在计算资源上快速部署科学应用程序,并将这些应用程序作为web服务公开给科学家。本文提出了一种新的科学应用框架,可以大大加快科学网关系统的开发周期。该框架使科学网关开发人员能够导入他们特定于领域的科学工作流脚本,并生成Web 2.0小工具来运行这些应用程序工作流,并可视化工作流执行的输出,而无需编写任何与Web相关的代码。通过将这些特定于应用程序的小工具和工作流管理框架中预定义的一些常用小工具组合在一起,开发人员可以轻松地设置自定义的计算科学网关,以满足社区需求。我们用计算生物化学中的一个例子来说明这个框架的实用性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Accelerating science gateway development with Web 2.0 and Swift
A Science Gateway is a computational web portal that enables scientists to run scientific simulations, data analysis, and visualization through their web browsers. The major problem of building a science gateway on TeraGrid is how to deploy scientific applications rapidly on computational resources and expose these applications as web services to scientists. In this paper we propose a novel science application framework that can greatly accelerate the development cycle of science gateway systems. This framework enables science gateway developers to import their domain-specific scientific workflow scripts and generate Web 2.0 gadgets for running these application workflows and visualizing the output from workflow executions without writing any web related code. By assembling these application-specific gadgets and some common gadgets predefined in the framework for workflow management, developers can easily set up a customized computational science gateway to meet community requirements. We demonstrate the utility of the framework with an example from computational biochemistry.
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