HPC数据的协同监控和可视化

Roselyne B. Tchoua, H. Abbasi, S. Klasky, Qing Liu, N. Podhorszki, D. Pugmire, Yuan Tian, M. Wolf
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引用次数: 2

摘要

随着模拟开始扩展到极端的处理器数量,试图理解宇宙的奥秘,协作成为科学家日常生活中必不可少的一部分,因为他们要运行、分析和处理这些模拟的数据。与我们合作的大多数团队的工作方式与他们过去的工作方式相同,没有使用有效的协作工具与他们的同伴分享他们的知识。合作通常是事后才想到的,而且往往是在一个尴尬的环境中处理的。我们认为,将协作引入本质上具有抵抗力的领域的最佳方式是嵌入到低级别和隐藏的系统组件中,以便科学家无需有意识地投入额外的努力即可进行协作。基于这一假设,本文介绍了我们在创建一个协作系统方面的工作,该系统允许不同的科学家有效地协同工作。我们系统的两个主要方面是我们使用出处来关联文件及其与领域专家感兴趣的信息相关联的元数据,以及一个易于使用的高性能I/O系统,该系统可以用统一的模式自动注释输出文件。为了实现我们的目标,我们利用了现有的I/O框架,ADIOS和现有的web界面,eSiMon,并添加了新的技术和机制来有效地将计算和可视化结合在一起。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Collaborative monitoring and visualization of HPC data
As simulations begin to scale to extreme processor counts trying to understand the mysteries of the universe, collaboration becomes an essential piece of the scientists' daily life as they work to run, analyze, and process their data from these simulations. Most of the teams that we collaborate with work identically to the way they did in the past, without using effective collaborative tools to share their knowledge with their peers. Collaboration is usually an afterthought, and is often handled in an awkward setting. We believe the best way to introduce collaboration into areas that are resistant by nature is to embed into low level and hidden system components so that scientists collaborate without consciously putting in extra efforts. Based on this hypothesis, this paper presents our work in creating a collaborative system, which allows a diverse set of scientists to work together efficiently. Two of the main aspects of our system are in our use of provenance to associate files and its associated metadata with the information that domain experts are interested in, and an easy-to-use high-performance I/O system which automatically annotates the output file(s) with a unified schema. To accomplish our goals, we leverage an existing I/O framework, ADIOS and an existing web interface, eSiMon, and add new techniques and mechanism to efficiently bring together computation and visualization.
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