从基因表达数据聚类中提取符号规则

Welbson S. Costa, Mateus S. de Assis, M. D. Souto
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引用次数: 0

摘要

在过去的几年里,越来越多的自动化应用于生物过程,导致了重要的生物数据的快速积累。这些数据中存在的广泛的生物学含义使其分析不适合通过传统计算。在这种背景下,机器学习(ML)技术已经显示出非常有前途。用于分析这些数据的ML技术之一是聚类方法。实验研究表明,通过这种方法产生的聚类通常在生物学上是有意义的。然而,一般来说,解释形成的群集的生物学意义是一项非常复杂的任务。因此,本文致力于研究能够更直接地解释由聚类技术形成的聚类的技术。为了做到这一点,无监督机器学习技术(聚类技术)将与监督机器学习技术(规则生成)相关联。目标是生成符号结构,如IF-THEN规则,这对人类来说更容易理解
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Extracting Symbolic Rules from Clustering of Gene Expression Data
In the last few years, the increasing automation applied to Biology processes has led to a fast accumulation of im- portant biological data. The wide biological implications present in these data makes its analysis unsuitable via con- ventional computing. In this context, Machine Learning (ML) techniques have been showing very promising. One of the ML techniques for analyzing these data is cluster- ing methods. Experimental studies have shown that, often, clusters generated via such methods are biologically mean- ingful. However, in general, the interpretation of the bio- logical meaning of the clusters formed is a very complex task. Thus, this paper invests its efforts in the study of tech- niques that makes the interpretation of clusters formed by clustering techniques more straightforward. In order to do so, unsupervisedML techniques (clustering techniques) will be associated with supervised ML techniques (rule genera- tion). The goal is to generate symbolic structures, such as IF-THEN rules, which are more comprehensible for humans
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