{"title":"现代人与泛穴居人β -珠蛋白基因的尺度图比较","authors":"Imen Messaoudi, A. Oueslati, Z. Lachiri","doi":"10.1109/ATSIP.2018.8364466","DOIUrl":null,"url":null,"abstract":"Gene sequences have enabled investigators to explore questions of genomes complexity in related organisms. The ß-globin gene is a successful example which is widely used in comparative genomics and evolutionary analyses. Herein, we report the results of a comparative DNA sequence analysis of the homologous β-globin genes in two taxa: Homosapies (human) and Pan Troglodytes (Chimpanzee). To this end, we propose a new method to represent the DNA sequences into scalogram images based on the complex Morlet wavelet transform. As for the coding method which transforms the DNA letters into a signal, we use the Frequency Chaos Game Signal of trinucleotides (coined FCGS3). The statistical analysis of the two HBB-gene images shows good correlation between the proposed method and the DNA alignment result.","PeriodicalId":332253,"journal":{"name":"2018 4th International Conference on Advanced Technologies for Signal and Image Processing (ATSIP)","volume":"3 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2018-03-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Comparing the scalogram images of the Beta-Globin gene in Homosapiens and Pan Troglodytes\",\"authors\":\"Imen Messaoudi, A. Oueslati, Z. Lachiri\",\"doi\":\"10.1109/ATSIP.2018.8364466\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Gene sequences have enabled investigators to explore questions of genomes complexity in related organisms. The ß-globin gene is a successful example which is widely used in comparative genomics and evolutionary analyses. Herein, we report the results of a comparative DNA sequence analysis of the homologous β-globin genes in two taxa: Homosapies (human) and Pan Troglodytes (Chimpanzee). To this end, we propose a new method to represent the DNA sequences into scalogram images based on the complex Morlet wavelet transform. As for the coding method which transforms the DNA letters into a signal, we use the Frequency Chaos Game Signal of trinucleotides (coined FCGS3). The statistical analysis of the two HBB-gene images shows good correlation between the proposed method and the DNA alignment result.\",\"PeriodicalId\":332253,\"journal\":{\"name\":\"2018 4th International Conference on Advanced Technologies for Signal and Image Processing (ATSIP)\",\"volume\":\"3 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2018-03-21\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"2018 4th International Conference on Advanced Technologies for Signal and Image Processing (ATSIP)\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1109/ATSIP.2018.8364466\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"2018 4th International Conference on Advanced Technologies for Signal and Image Processing (ATSIP)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/ATSIP.2018.8364466","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Comparing the scalogram images of the Beta-Globin gene in Homosapiens and Pan Troglodytes
Gene sequences have enabled investigators to explore questions of genomes complexity in related organisms. The ß-globin gene is a successful example which is widely used in comparative genomics and evolutionary analyses. Herein, we report the results of a comparative DNA sequence analysis of the homologous β-globin genes in two taxa: Homosapies (human) and Pan Troglodytes (Chimpanzee). To this end, we propose a new method to represent the DNA sequences into scalogram images based on the complex Morlet wavelet transform. As for the coding method which transforms the DNA letters into a signal, we use the Frequency Chaos Game Signal of trinucleotides (coined FCGS3). The statistical analysis of the two HBB-gene images shows good correlation between the proposed method and the DNA alignment result.