蛋白质组学信息质量管理研究

A. Preece, Binling Jin, P. Missier, Suzanne M. Embury, D. Stead, Al Brown
{"title":"蛋白质组学信息质量管理研究","authors":"A. Preece, Binling Jin, P. Missier, Suzanne M. Embury, D. Stead, Al Brown","doi":"10.1109/CBMS.2006.160","DOIUrl":null,"url":null,"abstract":"We outline the application of a framework for managing information quality (IQ) in proteomics. The approach allows scientists to define the quality characteristics that are of importance in their particular domain, by extending a generic ontology of IQ concepts. Two quality indicators are defined for proteomic experiments: hit ratio and mass coverage. We describe how our framework allows experiments marked-up in a Standardformat (e.g. PEDRo) to be annotated with these computed indicators, and how the annotations can be viewed using a convenient plugin to the commonly-used Pedro data entry tool","PeriodicalId":208693,"journal":{"name":"19th IEEE Symposium on Computer-Based Medical Systems (CBMS'06)","volume":"20 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2006-06-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"3","resultStr":"{\"title\":\"Towards the Management of Information Quality in Proteomics\",\"authors\":\"A. Preece, Binling Jin, P. Missier, Suzanne M. Embury, D. Stead, Al Brown\",\"doi\":\"10.1109/CBMS.2006.160\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"We outline the application of a framework for managing information quality (IQ) in proteomics. The approach allows scientists to define the quality characteristics that are of importance in their particular domain, by extending a generic ontology of IQ concepts. Two quality indicators are defined for proteomic experiments: hit ratio and mass coverage. We describe how our framework allows experiments marked-up in a Standardformat (e.g. PEDRo) to be annotated with these computed indicators, and how the annotations can be viewed using a convenient plugin to the commonly-used Pedro data entry tool\",\"PeriodicalId\":208693,\"journal\":{\"name\":\"19th IEEE Symposium on Computer-Based Medical Systems (CBMS'06)\",\"volume\":\"20 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2006-06-22\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"3\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"19th IEEE Symposium on Computer-Based Medical Systems (CBMS'06)\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1109/CBMS.2006.160\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"19th IEEE Symposium on Computer-Based Medical Systems (CBMS'06)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/CBMS.2006.160","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 3

摘要

我们概述了在蛋白质组学中管理信息质量(IQ)的框架的应用。该方法允许科学家通过扩展IQ概念的通用本体来定义在其特定领域中重要的质量特征。为蛋白质组学实验定义了两个质量指标:命中率和质量覆盖率。我们描述了我们的框架如何允许以标准格式标记的实验(例如PEDRo)使用这些计算指标进行注释,以及如何使用常用的PEDRo数据输入工具的方便插件查看注释
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Towards the Management of Information Quality in Proteomics
We outline the application of a framework for managing information quality (IQ) in proteomics. The approach allows scientists to define the quality characteristics that are of importance in their particular domain, by extending a generic ontology of IQ concepts. Two quality indicators are defined for proteomic experiments: hit ratio and mass coverage. We describe how our framework allows experiments marked-up in a Standardformat (e.g. PEDRo) to be annotated with these computed indicators, and how the annotations can be viewed using a convenient plugin to the commonly-used Pedro data entry tool
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信