超越同质分解:大规模并行系统上的缩放远程力

D. Richards, J. Glosli, B. Chan, M. Dorr, E. Draeger, J. Fattebert, W. D. Krauss, T. Spelce, F. Streitz, M. Surh, John A. Gunnels
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引用次数: 32

摘要

随着超级计算机预计将从数千个扩展到数百万个核心,科学家面临的挑战之一是如何有效地利用这些不断增加的数量。我们在这里报告了一种方法,该方法通过根据组件算法的缩放属性划分工作来创建异构分解。我们通过开发热致密等离子体模型的能力来展示我们的策略。我们已经在德国j lich超级计算中心的294,912 cpu JUGENE计算机上进行了从数百万到数十亿带电粒子的基准计算,包括28亿粒子模拟,达到259.9 TFlop/s(峰值性能的26%)。有了这种前所未有的模拟能力,我们已经开始在理论和实验都缺乏的条件下研究等离子体聚变物理——在等离子体开始燃烧的强耦合状态下。我们的策略适用于其他涉及远程力(即生物或天体物理模拟)的问题。我们相信,这里演示的灵活的异构分解方法将允许许多问题跨当前和下一代机器进行扩展。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Beyond homogeneous decomposition: scaling long-range forces on Massively Parallel Systems
With supercomputers anticipated to expand from thousands to millions of cores, one of the challenges facing scientists is how to effectively utilize this ever-increasing number. We report here an approach that creates a heterogeneous decomposition by partitioning effort according to the scaling properties of the component algorithms. We demonstrate our strategy by developing a capability to model hot dense plasma. We have performed benchmark calculations ranging from millions to billions of charged particles, including a 2.8 billion particle simulation that achieved 259.9 TFlop/s (26% of peak performance) on the 294,912 cpu JUGENE computer at the Jülich Supercomputing Centre in Germany. With this unprecedented simulation capability we have begun an investigation of plasma fusion physics under conditions where both theory and experiment are lacking-in the strongly-coupled regime as the plasma begins to burn. Our strategy is applicable to other problems involving long-range forces (i.e., biological or astrophysical simulations). We believe that the flexible heterogeneous decomposition approach demonstrated here will allow many problems to scale across current and next-generation machines.
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