利用RAPD研究蝴蝶属部分种的系统发育关系

Pankaj Singh
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引用次数: 0

摘要

本研究是为了找出蝴蝶中最大的科蛱蝶科蛱蝶属(Junonia)的4个种之间的相似性和多样性。采用RAPD - PCR技术对柠檬、阿拉马纳、hierta、算法等9个通用引物OPA-1、OPA-2、OPA-3、OPA-4、OPA-5、OPP-9、OPP-18、OPN-17、OPN-16进行基因组DNA筛选。引物OPN-17未产生条带,其余8条引物均为离散条带。引物OPP-18明显只突出200个碱基对以下的物种特异性条带。引物OPA-2产生显著带型,考虑进一步分析。利用RAPD凝胶图像解析的二值数据构建树突图。得到两个分支,其中一个分支类群J. hierta和J. lemonias为姊妹类群,另一个分支类群J. alamana和J. orithiya为姊妹类群。通过Jaccard相似性和距离指数矩阵和主成分分析支持调查。从所获得的树形图和距离矩阵的解释可以看出,两个物种之间的遗传组成是接近的,而一些遗传特征是种特异性的。因此,这些由不同引物产生的模式可以被认为是诊断带,并可能有助于Junonia物种鉴定的分子标记。因此,在相关的进化研究中,无论何时进行研究,这些标记都将在确定进化方向方面发挥关键作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Phylogenetic Relationship of Some Species of Genus Junonia Butterfly Using RAPD
The present investigation was carried out to find out similarities and diversities between four species of the genus Junonia belonging to Nymphalidae, the largest family of butterflies. The genomic DNA eluded from the species, J. lemonias, J. alamana, J. hierta and J. orithiya were screened by nine universal primers OPA-1, OPA-2, OPA-3, OPA-4, OPA-5, OPP-9, OPP-18, OPN-17, OPN-16 through RAPD - PCR. Primer OPN-17 did not produce any bands, whereas, the discrete banding pattern was observed in the remaining 8 primers. Primer OPP-18 distinctly highlights only species-specific bands ranging below 200 base pairs. Primer OPA-2 that produced significant banding patterns was taken into consideration for further analysis. The dendrogram was constructed by using binary data interpreted from the RAPD gel image. Two clades were obtained, where in one clade taxa J. hierta and J. lemonias cluster as sister taxa, and in the other clade taxa J. alamana and J. orithiya cluster as sister taxa. The investigation was supported by the Jaccard similarity and distance indices matrix and Principal component analysis. The interpretation from obtained dendrogram and distance matrix reveals that there is closeness within two species in their genetic makeup, whereas some genetic characters are expressed as species-specific. Henceforth, these patterns produced by respective primers can be considered as diagnostic bands and may contribute to molecular markers for Junonia species identification. Thus, in related evolutionary studies whenever be under investigation these markers will play a pivotal role in concluding the direction of evolution.
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