{"title":"跨计算机阵列上的分子动力学","authors":"J. Perram, H.G. Petersen","doi":"10.1109/PARBSE.1990.77216","DOIUrl":null,"url":null,"abstract":"The implementation of a molecular dynamics simulation on a 10 transputer system is reported. The implementation exploits fully the geometric parallelism of the problem. A simple model of the computing and communications overheads leads to predictions of the optimal scaling of the problem size with the number of processors. The implementation exploits fully the domain decomposition paradigm in which load balancing is guaranteed by the compressibility theorem of statistical mechanics.<<ETX>>","PeriodicalId":389644,"journal":{"name":"Proceedings. PARBASE-90: International Conference on Databases, Parallel Architectures, and Their Applications","volume":"13 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"1990-03-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":"{\"title\":\"Molecular dynamics on transputer arrays\",\"authors\":\"J. Perram, H.G. Petersen\",\"doi\":\"10.1109/PARBSE.1990.77216\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"The implementation of a molecular dynamics simulation on a 10 transputer system is reported. The implementation exploits fully the geometric parallelism of the problem. A simple model of the computing and communications overheads leads to predictions of the optimal scaling of the problem size with the number of processors. The implementation exploits fully the domain decomposition paradigm in which load balancing is guaranteed by the compressibility theorem of statistical mechanics.<<ETX>>\",\"PeriodicalId\":389644,\"journal\":{\"name\":\"Proceedings. PARBASE-90: International Conference on Databases, Parallel Architectures, and Their Applications\",\"volume\":\"13 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"1990-03-07\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Proceedings. PARBASE-90: International Conference on Databases, Parallel Architectures, and Their Applications\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1109/PARBSE.1990.77216\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Proceedings. PARBASE-90: International Conference on Databases, Parallel Architectures, and Their Applications","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/PARBSE.1990.77216","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
The implementation of a molecular dynamics simulation on a 10 transputer system is reported. The implementation exploits fully the geometric parallelism of the problem. A simple model of the computing and communications overheads leads to predictions of the optimal scaling of the problem size with the number of processors. The implementation exploits fully the domain decomposition paradigm in which load balancing is guaranteed by the compressibility theorem of statistical mechanics.<>