基于RFE-RF的新型冠状病毒拉曼光谱分类与鉴定

Xueyu Yang, Wandan Zeng, Min Wu
{"title":"基于RFE-RF的新型冠状病毒拉曼光谱分类与鉴定","authors":"Xueyu Yang, Wandan Zeng, Min Wu","doi":"10.1117/12.2690704","DOIUrl":null,"url":null,"abstract":"The Raman spectral data feature is generally the Raman wavelength of the sample, and there is a correlation between the feature attributes. Too many features will lead to weak generalization ability of the model, so a Recursive Feature Elimination (RFE) dimensionality reduction method combined with BP neural network is proposed to classify the Raman spectrum of the COVID-19. Firstly, the collected serum Raman spectral data of the population were processed, the maximum and minimum standard scaling method (Min-Max), the Savitzky-Golay smoothing filter method, and then the recursive feature elimination (RFE-RF) based on the random forest base model and two different dimensionality reduction methods of PCA reduce the dimensionality of Raman spectral data and classify them through the BP neural network algorithm model. The experimental results show that the RFE-RF dimensionality reduction method can improve the accuracy of the classification algorithm, providing a new idea for the detection of the COVID-19, with high accuracy, and the classification accuracy of the model is 92.47%","PeriodicalId":164997,"journal":{"name":"Conference on Biomedical Photonics and Cross-Fusion","volume":"1 3 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2023-07-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Raman spectrum classification and identification of COVID-19 based on RFE-RF\",\"authors\":\"Xueyu Yang, Wandan Zeng, Min Wu\",\"doi\":\"10.1117/12.2690704\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"The Raman spectral data feature is generally the Raman wavelength of the sample, and there is a correlation between the feature attributes. Too many features will lead to weak generalization ability of the model, so a Recursive Feature Elimination (RFE) dimensionality reduction method combined with BP neural network is proposed to classify the Raman spectrum of the COVID-19. Firstly, the collected serum Raman spectral data of the population were processed, the maximum and minimum standard scaling method (Min-Max), the Savitzky-Golay smoothing filter method, and then the recursive feature elimination (RFE-RF) based on the random forest base model and two different dimensionality reduction methods of PCA reduce the dimensionality of Raman spectral data and classify them through the BP neural network algorithm model. The experimental results show that the RFE-RF dimensionality reduction method can improve the accuracy of the classification algorithm, providing a new idea for the detection of the COVID-19, with high accuracy, and the classification accuracy of the model is 92.47%\",\"PeriodicalId\":164997,\"journal\":{\"name\":\"Conference on Biomedical Photonics and Cross-Fusion\",\"volume\":\"1 3 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2023-07-28\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Conference on Biomedical Photonics and Cross-Fusion\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1117/12.2690704\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Conference on Biomedical Photonics and Cross-Fusion","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1117/12.2690704","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

摘要

拉曼光谱数据特征一般为样品的拉曼波长,特征属性之间存在相关性。针对特征过多会导致模型泛化能力弱的问题,提出了一种结合BP神经网络的递归特征消除(RFE)降维方法对COVID-19的拉曼光谱进行分类。首先对采集到的人群血清拉曼光谱数据进行处理,采用最大最小标准标度法(Min-Max)、Savitzky-Golay平滑滤波法,然后基于随机森林基模型和PCA的两种不同降维方法的递归特征消去法(RFE-RF)对拉曼光谱数据进行降维,并通过BP神经网络算法模型进行分类。实验结果表明,RFE-RF降维方法可以提高分类算法的准确率,为COVID-19的检测提供了新的思路,准确率较高,模型的分类准确率为92.47%
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Raman spectrum classification and identification of COVID-19 based on RFE-RF
The Raman spectral data feature is generally the Raman wavelength of the sample, and there is a correlation between the feature attributes. Too many features will lead to weak generalization ability of the model, so a Recursive Feature Elimination (RFE) dimensionality reduction method combined with BP neural network is proposed to classify the Raman spectrum of the COVID-19. Firstly, the collected serum Raman spectral data of the population were processed, the maximum and minimum standard scaling method (Min-Max), the Savitzky-Golay smoothing filter method, and then the recursive feature elimination (RFE-RF) based on the random forest base model and two different dimensionality reduction methods of PCA reduce the dimensionality of Raman spectral data and classify them through the BP neural network algorithm model. The experimental results show that the RFE-RF dimensionality reduction method can improve the accuracy of the classification algorithm, providing a new idea for the detection of the COVID-19, with high accuracy, and the classification accuracy of the model is 92.47%
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信