为生物医学研究提供信息通信技术基础设施

T. Nyrönen, Jarno Laitinen, Olli Tourunen, Danny Sternkopf, Risto Laurikainen, Per Öster, P. Lehtovuori, T. Miettinen, Tomi Simonen, Teemu Perheentupa, Imre Vastrik, Olli-P. Kallioniemi, A. Lyall, J. Thornton
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引用次数: 8

摘要

本文描述了用于科学计算的基础设施即服务(IaaS)概念的实现,以及CSC - IT科学中心基于生物医学用例需求的七个服务试点实现。关键的服务设计要求是能够使用成功使用用例所需的任何科学软件环境,并为科学家用户无缝地提供分布式基础设施ICT资源与本地ICT资源。该服务概念针对研究机构的IT管理员,通过专用网络解决方案提供虚拟化的计算集群和存储容量。虚拟化资源可以作为虚拟节点成为本地集群的一部分,并且在网络性能足够的情况下,它们可以与物理节点共享相同的文件系统。然后可以使当地资源的扩展变得透明,从而使科学家最终用户能够轻松地使用基础设施。基于20个月的服务试点,大多数生物医学组织对IaaS提供的分布式计算和存储资源表达了持续增长的需求。我们的结论是,IaaS的成功实施可以改善访问并减少运行生物医学研究所需的昂贵的ICT基础设施的努力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Delivering ICT infrastructure for biomedical research
This paper describes an implementation of the Infrastructure-as-a-Service (IaaS) concept for scientific computing and seven service pilot implementations with requirements from biomedical use cases at the CSC - IT Center for Science. The key service design requirements were enabling the use of any scientific software environment the use cases needed to succeed, and delivering the distributed infrastructure ICT resources seamlessly with the local ICT resources for the scientist users. The service concept targets the IT administrators at research organisations and delivers virtualised compute cluster and storage capacity via private network solutions. The virtualised resources can become part of the local cluster as virtual nodes and they can share the same file system as the physical nodes assuming the network performance is sufficient. Extension of the local resources can then be made transparent to enable an easy infrastructure uptake to the scientist end-users. Based on 20 months of service piloting most of the biomedical organisations express a sustained and growing need for the distributed compute and storage resources delivered with the IaaS. We conclude that a successful implementation of the IaaS can improve access and reduce the effort to run expensive ICT infrastructure needed for biomedical research.
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