酵母精氨酸准许酶can1结构的突变分析

N. Koltovaya, E. Dushanov
{"title":"酵母精氨酸准许酶can1结构的突变分析","authors":"N. Koltovaya, E. Dushanov","doi":"10.29039/rusjbpc.2022.0561","DOIUrl":null,"url":null,"abstract":". Currently, the structure and functioning of transmitters, which more than 250 members in different organisms, maintaining pH and osmosis, transport of amino acids and neurotransmitters, such as serotonin, are being intensively studied. This class of proteins is characterized by low nucleotide homology, but a similar structure. Enzymes have a cylindrical shape formed by transmembrane elements consisting of α-helices. Yeast arginine permiase Can1 can serve as a good model for studying the structure and mechanism of transport. The incorporation of arginine is proton pump dependent, thus Can1 catalyzes H+/arginine symport. Inactivation of Can1 leads to resistance to the arginine analogue canavanine. Widespread use of Can1R-mutation detection system allows selecting among several thousand mutations single missense mutations that inactivate Can1 yeast arginine permiase. At the 3D level, the large mutants are ranked res. 184 out of res. 590 of the enzyme. A stable dynamic model of permiase and charge landscape have been constructed. We selected several crucial amino acid residues, any replacement of which lead to enzyme inactivation. They are increased the list of the most significant amino acid residues involved in the transport of arginine. In the future, it is planned to continue the analysis of selected amino acid residues for a more detailed understanding of the mechanism of substrate transport.","PeriodicalId":169374,"journal":{"name":"Russian Journal of Biological Physics and Chemisrty","volume":"55 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2022-11-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"MUTATIONAL ANALYSIS OF STRUCTURE OF YEAST ARGININE PERMIASE CAN1\",\"authors\":\"N. Koltovaya, E. Dushanov\",\"doi\":\"10.29039/rusjbpc.2022.0561\",\"DOIUrl\":null,\"url\":null,\"abstract\":\". Currently, the structure and functioning of transmitters, which more than 250 members in different organisms, maintaining pH and osmosis, transport of amino acids and neurotransmitters, such as serotonin, are being intensively studied. This class of proteins is characterized by low nucleotide homology, but a similar structure. Enzymes have a cylindrical shape formed by transmembrane elements consisting of α-helices. Yeast arginine permiase Can1 can serve as a good model for studying the structure and mechanism of transport. The incorporation of arginine is proton pump dependent, thus Can1 catalyzes H+/arginine symport. Inactivation of Can1 leads to resistance to the arginine analogue canavanine. Widespread use of Can1R-mutation detection system allows selecting among several thousand mutations single missense mutations that inactivate Can1 yeast arginine permiase. At the 3D level, the large mutants are ranked res. 184 out of res. 590 of the enzyme. A stable dynamic model of permiase and charge landscape have been constructed. We selected several crucial amino acid residues, any replacement of which lead to enzyme inactivation. They are increased the list of the most significant amino acid residues involved in the transport of arginine. In the future, it is planned to continue the analysis of selected amino acid residues for a more detailed understanding of the mechanism of substrate transport.\",\"PeriodicalId\":169374,\"journal\":{\"name\":\"Russian Journal of Biological Physics and Chemisrty\",\"volume\":\"55 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2022-11-24\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Russian Journal of Biological Physics and Chemisrty\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.29039/rusjbpc.2022.0561\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Russian Journal of Biological Physics and Chemisrty","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.29039/rusjbpc.2022.0561","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

摘要

。目前,递质的结构和功能正在被深入研究,这些递质在不同的生物体中有250多个成员,维持pH和渗透,氨基酸和神经递质(如血清素)的运输。这类蛋白的特点是核苷酸同源性低,但结构相似。酶具有由α-螺旋组成的跨膜元件形成的圆柱形。酵母精氨酸准许酶Can1可以作为研究其结构和转运机制的良好模型。精氨酸的掺入依赖于质子泵,因此Can1催化H+/精氨酸的对称。Can1的失活导致了对精氨酸类似物canavanine的抗性。广泛使用的can1r突变检测系统允许在数千个突变中选择单个错义突变,使Can1酵母精氨酸许可酶失活。在3D水平上,大突变体在酶的590个位点中排名第184位。建立了许可酶和电荷景观的稳定动态模型。我们选择了几个关键的氨基酸残基,任何替换都会导致酶失活。它们增加了参与精氨酸运输的最重要的氨基酸残基列表。在未来,计划继续分析选定的氨基酸残基,以更详细地了解底物运输的机制。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
MUTATIONAL ANALYSIS OF STRUCTURE OF YEAST ARGININE PERMIASE CAN1
. Currently, the structure and functioning of transmitters, which more than 250 members in different organisms, maintaining pH and osmosis, transport of amino acids and neurotransmitters, such as serotonin, are being intensively studied. This class of proteins is characterized by low nucleotide homology, but a similar structure. Enzymes have a cylindrical shape formed by transmembrane elements consisting of α-helices. Yeast arginine permiase Can1 can serve as a good model for studying the structure and mechanism of transport. The incorporation of arginine is proton pump dependent, thus Can1 catalyzes H+/arginine symport. Inactivation of Can1 leads to resistance to the arginine analogue canavanine. Widespread use of Can1R-mutation detection system allows selecting among several thousand mutations single missense mutations that inactivate Can1 yeast arginine permiase. At the 3D level, the large mutants are ranked res. 184 out of res. 590 of the enzyme. A stable dynamic model of permiase and charge landscape have been constructed. We selected several crucial amino acid residues, any replacement of which lead to enzyme inactivation. They are increased the list of the most significant amino acid residues involved in the transport of arginine. In the future, it is planned to continue the analysis of selected amino acid residues for a more detailed understanding of the mechanism of substrate transport.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信