多核架构的球面区域查询

Hao Lu, S. Seal, Wei Guo, J. Poplawsky
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引用次数: 2

摘要

在这篇短文中,我们报告了多线程并行算法在多核架构上的球面区域查询的性能,这些多核架构是由材料科学中具有挑战性的数据分析应用驱动的。比较了两种基于树的算法和一种朴素算法的性能,以确定这些方法执行最佳的长度尺度。然后将最优算法用于扩展驱动材料科学应用程序,在包含数百万原子的数据集上使用32个OpenMP线程可以提供超过17倍的加速。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Spherical Region Queries on Multicore Architectures
In this short paper, we report the performance of multiple thread-parallel algorithms for spherical region queries on multicore architectures motivated by a challenging data analytics application in materials science. Performances of two tree-based algorithms and a naive algorithm are compared to identify the length scales at which these approaches perform optimally. The optimal algorithm is then used to scale the driving materials science application, which is shown to deliver over 17X speedup using 32 OpenMP threads on data sets containing many millions of atoms.
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