基于粗到细网络的肿瘤转移快速定位

Rui-cang Wang, Yun Gu, Jie Yang
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引用次数: 0

摘要

全幻灯片图像(WSIs)在乳腺癌的诊断中起着非常重要的作用,病理学家需要在这种十亿像素的病理图像上定位淋巴结转移。近年来,深度卷积神经网络在转移瘤定位方面显示出了很大的潜力,但如何快速定位转移瘤仍是一个挑战。在推理中,可以将wsi分割成小块进行分类,也可以对wsi上较大的图像块进行扫描。无论哪种方式,算法都需要在最佳放大下执行,这极大地限制了推理时间。在本文中,我们提出了一个级联的粗到细网络来加快wsi中转移的定位速度,该网络包含粗网络来处理低放大以快速发现粗转移,而细网络在高放大下有效地重新分类正响应。在Camelyon16数据集上进行的实验表明,与之前的方法相比,本文方法的定位速度最快,并且在测试集上可以实现81.0的定位平均FROC分数。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Cancer metastasis fast location based on coarse-to-fine network
The Whole Slide Images(WSIs) play a very important role in breast cancer diagnosis and the pathologist need to locate the lymph node metastasis on the such the gigapixel pathology image. Recently, the deep convolutional neural network has show the promise of metastases localization, it is still a challenge to fast locate the metastases. Either divide WSIs into small patches and perform classification or scan the bigger image block on WSIs in inference. In either way, the algorithm needs to be performed at the finest magnification, which greatly limits inference time. In this paper, we propose a cascade coarse to fine network to expedite the speed of to locate metastases in WSIs, which contain the coarse network to handle the low magnification to find the rough metastases speedily and the fine network efficiently reclassifies the positive responses at high magnification. The experiment is performed on the Camelyon16 dataset demonstrated that the proposed method compared to the previous method is the fastest and also can achieve the localization average FROC score of 81.0 on the test set.
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