朝着更快的基于随机分组的推理

Andrés Hoyos Idrobo, G. Varoquaux, B. Thirion
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引用次数: 1

摘要

在神经影像学中,多学科统计分析是必不可少的一步,因为它可以为所研究的人群得出结论。然而,神经影像学研究的能力不足,加上基于体素的方法缺乏稳定性和敏感性,可能导致不可重复的结果。基于随机分组的推理(randomrandomparcellbasbasicence, RPBI)是解决这一问题的一种方法,该方法已经显示出良好的经验性能。然而,使用初始RPBI公式中提出的聚集聚类算法来构建分组需要大量的计算成本。在本文中,我们探索了两种加速RPBI的策略:首先,我们使用一种称为递归最近邻集聚(ReNA)的快速聚类算法来查找包。其次,我们考虑多个包上p值的聚集,以避免置换检验。我们评估了它们的计算时间和恢复性能。作为一个主要结论,我们提倡使用(排列)RPBI与ReNA,因为它产生非常快的模型,同时保持较慢的方法的性能。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Towards a faster randomized parcellation based inference
In neuroimaging, multi-subject statistical analysis is an essential step, as it makes it possible to draw conclusions for the population under study. However, the lack of power in neuroimaging studies combined with the lack of stability and sensitivity of voxel-based methods may lead to non-reproducible results. A method designed to tackle this problem is Randomized Parcellation-Based Inference (RPBI), which has shown good empirical performance. Nevertheless, the use of an agglomerative clustering algorithm proposed in the initial RPBI formulation to build the parcellations entails a large computation cost. In this paper, we explore two strategies to speedup RPBI: Firstly, we use a fast clustering algorithm called Recursive Nearest Agglomeration (ReNA), to find the parcellations. Secondly, we consider the aggregation of p-values over multiple parcellations to avoid a permutation test. We evaluate their the computation time, as well as their recovery performance. As a main conclusion, we advocate the use of (permuted) RPBI with ReNA, as it yields very fast models, while keeping the performance of slower methods.
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