基于多元二元随机变量的遗传数据生成方法

Sucai Tian, Duoyun Qin, Ying Zhou
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引用次数: 1

摘要

随着社会经济的发展,统计学作为一门工具性学科在社会中的应用越来越广泛。其中,生物统计学是统计学的一个新兴分支,有很大的研究空间。生物遗传数据作为所有生物统计学研究的基础,在生物统计学中占有极其重要的地位。在以往的研究中,产生数据的方法有很多。生成遗传数据的关键是保证基因座之间的相关性(loci是locus的复数形式)。然而,许多研究者在模拟数据时忽略了基因座相关性这一重要问题,导致每个基因座生成的数据都是独立且不相关的。因此,我们使用多元二进制随机变量生成基因座数据(MBRV-data)。为了验证我们的方法可以用于生成生物统计学研究的数据,我们使用了大量的模拟来确定该方法的可行性。我们还通过调查人口分层方法来验证生成数据的有效性。模拟结果表明,mbrv数据可以很好地应用于基因型数据的模拟实验。无论是I类错误率还是功率,都可以反映本文所提出方法的有效性和合理性。这个方法已经在R中实现了。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Genetic Data Generation Method Based on Multivariate Binary Random Variables
With the development of society and economy, statistics is increasingly used as an instrumental discipline in our society. Among them, biostatistics is an emerging branch of statistics, which has much room for research. As the basis for all biostatistical researches, biological genetic data play an extremely important role in biostatistics. In previous researches, there have been many methods to generate data. The key to generate genetic data is to ensure the correlation between genetic loci (loci is the plural of locus). However, many researchers ignore the important issue of loci correlation when simulating data, resulting in data generated for each locus being independent and unrelated. Therefore, we used multivariate binary random variables to generate gene loci data (MBRV-data). To verify that our method can be used to generate data for biostatistical studies, we use extensive simulations to determine the feasibility of this method. We also validate the validity of the generated data by investigating population stratification methods. The result of these simulations shows that the MBRV-data can be well applied to the simulation experiment of genotype data. Whether it is the type I error rates or the power, it can reflect the validity and rationality of the method proposed in this paper. This method has been implemented in R.
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