蛋白质-蛋白质相互作用预测:最新进展

M. Shatnawi
{"title":"蛋白质-蛋白质相互作用预测:最新进展","authors":"M. Shatnawi","doi":"10.1109/DEXA.2017.30","DOIUrl":null,"url":null,"abstract":"Protein-protein interactions (PPI) occur at every level of cell functions. The identification of protein interactions provides a global picture of cellular functions and biological processes. It is also an essential step in the construction of PPI networks for human and other organisms. PPI prediction has been considered a promising alternative to the traditional drug design techniques. The identification of possible viral-host protein interaction can lead to a better understanding of infection mechanisms and, in turn, to the development of several medication drugs and treatment optimization. Several physiochemical experimental techniques have been applied to identify PPIs. However, these techniques are computationally expensive, significantly time consuming, and have covered only a small portion of the complete PPI networks. As a result, the need for computational techniques has been increased to validate experimental results and to predict non-discovered PPIs. This paper investigates and compares the recent computational PPI prediction approaches and discusses the technical challenges in this domain.","PeriodicalId":127009,"journal":{"name":"2017 28th International Workshop on Database and Expert Systems Applications (DEXA)","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2017-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"2","resultStr":"{\"title\":\"Protein-Protein Interaction Prediction: Recent Advances\",\"authors\":\"M. Shatnawi\",\"doi\":\"10.1109/DEXA.2017.30\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Protein-protein interactions (PPI) occur at every level of cell functions. The identification of protein interactions provides a global picture of cellular functions and biological processes. It is also an essential step in the construction of PPI networks for human and other organisms. PPI prediction has been considered a promising alternative to the traditional drug design techniques. The identification of possible viral-host protein interaction can lead to a better understanding of infection mechanisms and, in turn, to the development of several medication drugs and treatment optimization. Several physiochemical experimental techniques have been applied to identify PPIs. However, these techniques are computationally expensive, significantly time consuming, and have covered only a small portion of the complete PPI networks. As a result, the need for computational techniques has been increased to validate experimental results and to predict non-discovered PPIs. This paper investigates and compares the recent computational PPI prediction approaches and discusses the technical challenges in this domain.\",\"PeriodicalId\":127009,\"journal\":{\"name\":\"2017 28th International Workshop on Database and Expert Systems Applications (DEXA)\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2017-08-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"2\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"2017 28th International Workshop on Database and Expert Systems Applications (DEXA)\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1109/DEXA.2017.30\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"2017 28th International Workshop on Database and Expert Systems Applications (DEXA)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/DEXA.2017.30","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 2

摘要

蛋白质-蛋白质相互作用(PPI)发生在细胞功能的各个层面。蛋白质相互作用的鉴定提供了细胞功能和生物过程的全局图像。这也是构建人类和其他生物的PPI网络的重要一步。PPI预测已被认为是传统药物设计技术的一个有前途的替代方案。鉴定可能的病毒-宿主蛋白相互作用可以更好地了解感染机制,从而开发几种药物和优化治疗。几种物理化学实验技术已被应用于鉴定PPIs。然而,这些技术在计算上非常昂贵,非常耗时,并且只覆盖了完整PPI网络的一小部分。因此,对计算技术的需求增加了,以验证实验结果和预测未发现的ppi。本文研究和比较了最近的计算PPI预测方法,并讨论了该领域的技术挑战。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Protein-Protein Interaction Prediction: Recent Advances
Protein-protein interactions (PPI) occur at every level of cell functions. The identification of protein interactions provides a global picture of cellular functions and biological processes. It is also an essential step in the construction of PPI networks for human and other organisms. PPI prediction has been considered a promising alternative to the traditional drug design techniques. The identification of possible viral-host protein interaction can lead to a better understanding of infection mechanisms and, in turn, to the development of several medication drugs and treatment optimization. Several physiochemical experimental techniques have been applied to identify PPIs. However, these techniques are computationally expensive, significantly time consuming, and have covered only a small portion of the complete PPI networks. As a result, the need for computational techniques has been increased to validate experimental results and to predict non-discovered PPIs. This paper investigates and compares the recent computational PPI prediction approaches and discusses the technical challenges in this domain.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信