AEMVC:锚定增强多组学癌症亚型鉴定

Nan Zhou, Shunfang Wang, Zhuokun Tan
{"title":"AEMVC:锚定增强多组学癌症亚型鉴定","authors":"Nan Zhou, Shunfang Wang, Zhuokun Tan","doi":"10.1145/3570773.3570802","DOIUrl":null,"url":null,"abstract":"The discovery of cancer subtypes has helped researchers gain deeper insights into the study of oncology heterogeneity. However, since cancer complexity exists in various omics levels, extracting and adaptive combining complementary information across multi-omics are still challenges in cancer subtype prediction approaches. Based on the subspace learning of multi view clustering, we propose a new multi group cancer subtype recognition model based on anchor enhancement. Firstly, we generate anchors for each view's local similarity graph structure to enhance the connectivity between samples. Secondly, the graph convolution module is used to learn the consistency similarity features and specific features of patient samples in each view. Finally, the corresponding cancer subtype clustering results can be calculated according to the self-expressive coefficient matrix of the consistency similarity features obtained in the previous step.","PeriodicalId":153475,"journal":{"name":"Proceedings of the 3rd International Symposium on Artificial Intelligence for Medicine Sciences","volume":"64 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2022-10-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":"{\"title\":\"AEMVC: anchor enhanced multi-omics cancer subtype identification\",\"authors\":\"Nan Zhou, Shunfang Wang, Zhuokun Tan\",\"doi\":\"10.1145/3570773.3570802\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"The discovery of cancer subtypes has helped researchers gain deeper insights into the study of oncology heterogeneity. However, since cancer complexity exists in various omics levels, extracting and adaptive combining complementary information across multi-omics are still challenges in cancer subtype prediction approaches. Based on the subspace learning of multi view clustering, we propose a new multi group cancer subtype recognition model based on anchor enhancement. Firstly, we generate anchors for each view's local similarity graph structure to enhance the connectivity between samples. Secondly, the graph convolution module is used to learn the consistency similarity features and specific features of patient samples in each view. Finally, the corresponding cancer subtype clustering results can be calculated according to the self-expressive coefficient matrix of the consistency similarity features obtained in the previous step.\",\"PeriodicalId\":153475,\"journal\":{\"name\":\"Proceedings of the 3rd International Symposium on Artificial Intelligence for Medicine Sciences\",\"volume\":\"64 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2022-10-13\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Proceedings of the 3rd International Symposium on Artificial Intelligence for Medicine Sciences\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1145/3570773.3570802\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Proceedings of the 3rd International Symposium on Artificial Intelligence for Medicine Sciences","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1145/3570773.3570802","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 1

摘要

癌症亚型的发现帮助研究人员对肿瘤异质性的研究有了更深入的了解。然而,由于癌症的复杂性存在于不同的组学水平,多组学间互补信息的提取和自适应组合仍然是癌症亚型预测方法的挑战。基于多视图聚类的子空间学习,提出了一种基于锚增强的多组癌症亚型识别模型。首先,我们为每个视图的局部相似图结构生成锚点,以增强样本之间的连通性。其次,使用图卷积模块学习每个视图中患者样本的一致性相似特征和特定特征。最后,根据上一步得到的一致性相似特征的自表达系数矩阵,计算出相应的癌症亚型聚类结果。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
AEMVC: anchor enhanced multi-omics cancer subtype identification
The discovery of cancer subtypes has helped researchers gain deeper insights into the study of oncology heterogeneity. However, since cancer complexity exists in various omics levels, extracting and adaptive combining complementary information across multi-omics are still challenges in cancer subtype prediction approaches. Based on the subspace learning of multi view clustering, we propose a new multi group cancer subtype recognition model based on anchor enhancement. Firstly, we generate anchors for each view's local similarity graph structure to enhance the connectivity between samples. Secondly, the graph convolution module is used to learn the consistency similarity features and specific features of patient samples in each view. Finally, the corresponding cancer subtype clustering results can be calculated according to the self-expressive coefficient matrix of the consistency similarity features obtained in the previous step.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信