决策树和随机森林拟合生境选择的广义功能响应

Shaykhah Aldossari, D. Husmeier, Jason Matthiopoulos
{"title":"决策树和随机森林拟合生境选择的广义功能响应","authors":"Shaykhah Aldossari, D. Husmeier, Jason Matthiopoulos","doi":"10.11159/icsta21.125","DOIUrl":null,"url":null,"abstract":"Species Distribution Models (SDMs) are important regression tools in the ecological sciences that can support distribution predictions using different environmental variables. Most of the research in the area of SDMs has assumed that regression coefficients in these models are fixed. However, species respond differently to different habitats depending on the habitat availability, meaning that regression coefficients change as functions of habitat availability, a phenomenon known as a functional response in habitat selection. The generalized functional response (GFR) is a varying-coefficient extension of the basic SDM framework, designed for more robust forecasts of species distributions in a rapidly changing world. The original GFR model formulated the varying regression coefficients using a polynomial function approach, which led to improvements of forecasting performance in many applications. The purpose of this paper is to improve the out-of-sample performance of the GFR model using a decision tree and Breiman's random forest algorithm. We compare the original GFR model with a decision tree and random forests using the GFR model by applying both models to a real population dataset on house sparrows. The results revealed a noticeable improvement in terms of out-of-sample R² in the decision tree and the random forest approaches over the original GFR model.","PeriodicalId":403959,"journal":{"name":"Proceedings of the 3rd International Conference on Statistics: Theory and Applications","volume":"67 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2021-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"2","resultStr":"{\"title\":\"Generalized Functional Responses in Habitat Selection Fitted by Decision Trees and Random Forests\",\"authors\":\"Shaykhah Aldossari, D. Husmeier, Jason Matthiopoulos\",\"doi\":\"10.11159/icsta21.125\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Species Distribution Models (SDMs) are important regression tools in the ecological sciences that can support distribution predictions using different environmental variables. Most of the research in the area of SDMs has assumed that regression coefficients in these models are fixed. However, species respond differently to different habitats depending on the habitat availability, meaning that regression coefficients change as functions of habitat availability, a phenomenon known as a functional response in habitat selection. The generalized functional response (GFR) is a varying-coefficient extension of the basic SDM framework, designed for more robust forecasts of species distributions in a rapidly changing world. The original GFR model formulated the varying regression coefficients using a polynomial function approach, which led to improvements of forecasting performance in many applications. The purpose of this paper is to improve the out-of-sample performance of the GFR model using a decision tree and Breiman's random forest algorithm. We compare the original GFR model with a decision tree and random forests using the GFR model by applying both models to a real population dataset on house sparrows. The results revealed a noticeable improvement in terms of out-of-sample R² in the decision tree and the random forest approaches over the original GFR model.\",\"PeriodicalId\":403959,\"journal\":{\"name\":\"Proceedings of the 3rd International Conference on Statistics: Theory and Applications\",\"volume\":\"67 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2021-07-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"2\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Proceedings of the 3rd International Conference on Statistics: Theory and Applications\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.11159/icsta21.125\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Proceedings of the 3rd International Conference on Statistics: Theory and Applications","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.11159/icsta21.125","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 2

摘要

物种分布模型(SDMs)是生态科学中重要的回归工具,可以支持不同环境变量下的分布预测。在sdm领域的大多数研究都假设这些模型的回归系数是固定的。然而,物种对不同栖息地的响应取决于栖息地的可用性,这意味着回归系数随栖息地可用性的函数而变化,这种现象被称为栖息地选择中的功能响应。广义功能响应(GFR)是基本SDM框架的变系数扩展,用于在快速变化的世界中更可靠地预测物种分布。原始的GFR模型采用多项式函数的方法来制定不同的回归系数,从而在许多应用中提高了预测性能。本文的目的是利用决策树和Breiman随机森林算法来提高GFR模型的样本外性能。我们将原始GFR模型与决策树和随机森林模型进行比较,并将这两种模型应用于真实的家雀种群数据集。结果显示,决策树和随机森林方法在样本外R²方面比原始GFR模型有明显的改进。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Generalized Functional Responses in Habitat Selection Fitted by Decision Trees and Random Forests
Species Distribution Models (SDMs) are important regression tools in the ecological sciences that can support distribution predictions using different environmental variables. Most of the research in the area of SDMs has assumed that regression coefficients in these models are fixed. However, species respond differently to different habitats depending on the habitat availability, meaning that regression coefficients change as functions of habitat availability, a phenomenon known as a functional response in habitat selection. The generalized functional response (GFR) is a varying-coefficient extension of the basic SDM framework, designed for more robust forecasts of species distributions in a rapidly changing world. The original GFR model formulated the varying regression coefficients using a polynomial function approach, which led to improvements of forecasting performance in many applications. The purpose of this paper is to improve the out-of-sample performance of the GFR model using a decision tree and Breiman's random forest algorithm. We compare the original GFR model with a decision tree and random forests using the GFR model by applying both models to a real population dataset on house sparrows. The results revealed a noticeable improvement in terms of out-of-sample R² in the decision tree and the random forest approaches over the original GFR model.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信