环面网络上的平行分子动力学

K. Esselink, P. Hilbers
{"title":"环面网络上的平行分子动力学","authors":"K. Esselink, P. Hilbers","doi":"10.1109/SHPCC.1992.232681","DOIUrl":null,"url":null,"abstract":"The paper presents some theoretical results concerning molecular dynamics simulations on parallel networks. Specifically, it gives rules which, depending on the system to be simulated and on the processor network, gives the optimal mapping for a class of algorithms. It also shows that multi-particle potentials can efficiently be implemented when geometric parallelism is used. The paper demonstrates the approach by showing some results of simulations of water/oil/surfactant and of polymer systems on a toroidal network of transputers. Furthermore, it compares timing results of some simulations performed on this network with those performed on a Cray single-processor machine.<<ETX>>","PeriodicalId":254515,"journal":{"name":"Proceedings Scalable High Performance Computing Conference SHPCC-92.","volume":"16 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"1992-04-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"4","resultStr":"{\"title\":\"Parallel molecular dynamics on a torus network\",\"authors\":\"K. Esselink, P. Hilbers\",\"doi\":\"10.1109/SHPCC.1992.232681\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"The paper presents some theoretical results concerning molecular dynamics simulations on parallel networks. Specifically, it gives rules which, depending on the system to be simulated and on the processor network, gives the optimal mapping for a class of algorithms. It also shows that multi-particle potentials can efficiently be implemented when geometric parallelism is used. The paper demonstrates the approach by showing some results of simulations of water/oil/surfactant and of polymer systems on a toroidal network of transputers. Furthermore, it compares timing results of some simulations performed on this network with those performed on a Cray single-processor machine.<<ETX>>\",\"PeriodicalId\":254515,\"journal\":{\"name\":\"Proceedings Scalable High Performance Computing Conference SHPCC-92.\",\"volume\":\"16 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"1992-04-26\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"4\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Proceedings Scalable High Performance Computing Conference SHPCC-92.\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1109/SHPCC.1992.232681\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Proceedings Scalable High Performance Computing Conference SHPCC-92.","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/SHPCC.1992.232681","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 4

摘要

本文给出了平行网络分子动力学模拟的一些理论结果。具体来说,它给出了一些规则,这些规则取决于要模拟的系统和处理器网络,给出了一类算法的最优映射。结果表明,利用几何平行度可以有效地实现多粒子势。文中给出了水/油/表面活性剂和聚合物体系在环形转盘网络上的一些模拟结果,以证明该方法的可行性。此外,它还比较了在该网络上执行的一些仿真结果与在Cray单处理器机器上执行的仿真结果。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Parallel molecular dynamics on a torus network
The paper presents some theoretical results concerning molecular dynamics simulations on parallel networks. Specifically, it gives rules which, depending on the system to be simulated and on the processor network, gives the optimal mapping for a class of algorithms. It also shows that multi-particle potentials can efficiently be implemented when geometric parallelism is used. The paper demonstrates the approach by showing some results of simulations of water/oil/surfactant and of polymer systems on a toroidal network of transputers. Furthermore, it compares timing results of some simulations performed on this network with those performed on a Cray single-processor machine.<>
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信