利用细胞色素c氧化酶亚基I基因对孟加拉国7种斑蝶进行分子鉴定及系统发育关系分析

Ananna Ghosh, Muhammad Sohel Abedin, A. J. Howlader, Monwar Hossain
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引用次数: 2

摘要

蛱蝶亚科是蛱蝶的一个亚科,在形态和生态学上是最多样化的一组,在所有栖息地都有发生。本研究对7种柽柳科植物的细胞色素c氧化酶亚基I (COI)基因进行了测序、比对,并构建了系统发育树。通过比对国家生物技术信息中心(NCBI)基因库中的相关序列,证实了这3个Satyrinae物种的分子鉴定。COI序列的碱基组成分别为T(39.07%)、C(16.44%)、A(29.83%)和G(14.64%),具有很强的AT偏倚(68.9%)。沙蚕科种间的序列距离在0.09% ~ 0.18%之间。采用邻联法(NJ)和最大似然法(ML)构建了系统进化树,并以木犀为外类群。两棵树具有几乎相同的拓扑结构。沙蚕亚种间的亲缘关系为:Melanitis leda + [(Mycalesis mineus+(Mycalesis gotama+Mycalesis anaxas)) +(Ypthima baldus +(Lethe chandica+Elymnias hypermnestra)],表明沙蚕亚种与其他沙蚕亚种可能有远亲关系。这种聚类结果与目前的传统分类几乎相同。本研究证实了基于COI的DNA条形码技术是一种有效的蝴蝶鉴定方法,可以进一步有效地促进生物多样性和进化研究。贾汉吉纳格尔大学;科学通报8(1):67-74,2019 (6)
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Molecular identification and phylogenetic relationships of seven Satyrinae butterflies in Bangladesh using Cytochrome c oxidase subunit I gene
The Satyrinae is a subfamily of Nymphalid butterfly, which is morphologically and ecologically the most diverse group, occurring in all habitats. In the present study, Cytochrome c oxidase subunit I (COI) gene of seven species of Satyrinae was sequenced, aligned, and used to construct phylogenetic trees. The molecular identification of these Satyrinae species was confirmed by comparing the related sequences in the National Center for Biotechnology Information (NCBI) GenBank. The base compositions of the COI sequences were 39.07% T, 16.44% C, 29.83% A, and 14.64% G, revealing a strong AT bias (68.9%). The sequence distance among Satyrinae species ranged from 0.09% to 0.18%. Phylogenetic trees were constructed by the neighbor-joining (NJ) and maximum likelihood (ML) methods, using Orthetrum sabina as an outgroup. Both trees had almost identical topologies. The sampled species in Satyrinae exhibited the following relationships: Melanitis leda + [(Mycalesis mineus+(Mycalesis gotama+Mycalesis anaxias)) + (Ypthima baldus + (Lethe chandica+Elymnias hypermnestra))], suggesting that M. leda might be distantly related with the rest of the Satyrinae species. This clustering result is almost identical to current traditional classification. This study confirms that the COI based DNA barcoding is an efficient method for the identification of butterflies including Satyrinae species and, as such, may further contribute effectively to biodiversity and evolutionary research. Jahangirnagar University J. Biol. Sci. 8(1): 67-74, 2019 (June)
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