Pankaj Kumar Singh, Jayita Roy, S. Ganguli, P. Basu, V. Vishal, Abhisek Ranjan Bera, Abhaydeep Pandey, R. Banik
{"title":"人类miRNA上游区域保守调控基序特征的鉴定","authors":"Pankaj Kumar Singh, Jayita Roy, S. Ganguli, P. Basu, V. Vishal, Abhisek Ranjan Bera, Abhaydeep Pandey, R. Banik","doi":"10.1109/BSB.2016.7552128","DOIUrl":null,"url":null,"abstract":"Discovering and characterizing regulatory elements of miRNA genes are fundamental problems in bioinformatics field. An upstream regulatory motif can be described as a sequence element designated for binding of various protein factors imparting their subsequent effects on the transcription of the genes. For example, the transcription factors often bind to cis-acting conserved motif to regulate transcription, which typically are located upstream of transcriptional start sites. This work focuses on the identification of upstream regulatory elements of human microRNA genes by screening of their Kullback Liebler distance.","PeriodicalId":363820,"journal":{"name":"2016 International Conference on Bioinformatics and Systems Biology (BSB)","volume":"25 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2016-08-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Identification of conserved regulatory motif signatures in human miRNA upstream regions\",\"authors\":\"Pankaj Kumar Singh, Jayita Roy, S. Ganguli, P. Basu, V. Vishal, Abhisek Ranjan Bera, Abhaydeep Pandey, R. Banik\",\"doi\":\"10.1109/BSB.2016.7552128\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Discovering and characterizing regulatory elements of miRNA genes are fundamental problems in bioinformatics field. An upstream regulatory motif can be described as a sequence element designated for binding of various protein factors imparting their subsequent effects on the transcription of the genes. For example, the transcription factors often bind to cis-acting conserved motif to regulate transcription, which typically are located upstream of transcriptional start sites. This work focuses on the identification of upstream regulatory elements of human microRNA genes by screening of their Kullback Liebler distance.\",\"PeriodicalId\":363820,\"journal\":{\"name\":\"2016 International Conference on Bioinformatics and Systems Biology (BSB)\",\"volume\":\"25 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2016-08-25\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"2016 International Conference on Bioinformatics and Systems Biology (BSB)\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1109/BSB.2016.7552128\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"2016 International Conference on Bioinformatics and Systems Biology (BSB)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/BSB.2016.7552128","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Identification of conserved regulatory motif signatures in human miRNA upstream regions
Discovering and characterizing regulatory elements of miRNA genes are fundamental problems in bioinformatics field. An upstream regulatory motif can be described as a sequence element designated for binding of various protein factors imparting their subsequent effects on the transcription of the genes. For example, the transcription factors often bind to cis-acting conserved motif to regulate transcription, which typically are located upstream of transcriptional start sites. This work focuses on the identification of upstream regulatory elements of human microRNA genes by screening of their Kullback Liebler distance.