后基因组时代的两个操作概念:细胞的“活记忆”和分子代数

S. Bentolila
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引用次数: 2

摘要

克隆实验和干细胞“重编程”的第一次成功已经证明了细胞工作空间记忆和调节机制的原始作用,它们以读取模式使用存储在DNA数据库中的知识。我们通过考虑生命系统和信息学系统之间的类比:1)细胞质作为可读/写的存储设备;2)调控机制作为一种编程语言,由语法、分子代数定义;3)作为易失性程序的生物过程,无需写入即可执行;4) DNA作为只读模式的数据库。我们还介绍了两种生物算法的应用:免疫反应和糖原代谢。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Two operative concepts for the post-genomic era: the "memoire vive" of the cell and a molecular algebra
The first successes in cloning experiments and stem cell "reprogramming" have already demonstrated the primordial role of cellular working-space memory and regulatory mechanisms, which use the knowledge stored in the DNA database in read mode. We present an analogy between living systems and informatics systems by considering: 1) the cell cytoplasm as a memory device accessible as read/write; 2) the mechanisms of regulation as a programming language defined by a grammar, a molecular algebra; 3) biological processes as volatile programs which are executed without being written; 4) DNA as a database in read only mode. We also present applications to two biological algorithms: the immune response and glycogen metabolism.
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