支持农业地球物理学中成功的数据和代码共享实践

V. Iván, B. Mary, G. Blanchy, Maximillian Weigand, S. Garré
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摘要

农业地球物理学包括应用地球物理方法解决近地表农业问题。这是一个跨学科的领域,由于农业地球物理工具的许多优点:非侵入性,具有合理空间分辨率的大体积样本,高通量,延时可能性。为了联合农业地球物理学界并向研究人员提供该领域的概述,我们编制了农业地球物理研究目录(CAGS)。目录及其内容在开放许可下可用,并促进实施公平数据原则的实践。这些原则鼓励朝着可查找、可访问、可互操作和可重用的共享数据和代码的方向发展。CAGS的最大优势在于它提供了当前研究状态的概述,同时提供了元数据、相关数据集和与发表这些数据的文章相关的计算笔记本。通过这种方式,CAGS通过提供重现论文结果的数据集和处理步骤来鼓励可重复性研究。其目标是最终将农业地球物理界团结在数据处理和数据解释的共同标准周围。该网站托管在GitHub (https://agrogeophy.github.io/catalog/)上。CAGS的开放性和每个人都可以参与其中的可能性使它成为一个很好的平台,可以促进不同国际研究团队之间的知识交流。本杰明·玛丽和纪尧姆·布兰奇,2020。农业地球物理研究目录。doi: 10.5281 / zenodo.4058524。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Supporting successful data and codes sharing practices in agrogeophysics

Agrogeophysics comprises the use of geophysical methods applied to near surface agricultural problems. It is an interdisciplinary field which has been gaining momentum given the many advantages of geophysical tools for agriculture: non-invasiveness, large volume sample with reasonable spatial resolution, high-throughput, time-lapse possibility. In order to federate the agrogeophysical community and provide an overview of the field to researchers, we developed the catalog of agrogeophysical studies (CAGS). The catalog and its content is available under open licences and promotes practices that implement the FAIR Data Principles. These principles encourage progress toward sharing data and codes that are Findable, Accessible, Interoperable, and Reusable. The biggest strength of the CAGS is that it provides an overview of the current research state while providing metadata, associated datasets, and computational notebooks connected to the articles in which they were published. In this way, CAGS encourages reproducible research by providing the datasets and processing steps to reproduce the results of the papers. The ambition is to ultimately unite the agrogeophysical community around common standards for data processing and data interpretation. The website is hosted on GitHub (https://agrogeophy.github.io/catalog/). The open nature of CAGS and the possibility for everyone to contribute to it makes it a great platform to increase knowledge exchange across the different various international research teams.

Benjamin Mary, and Guillaume Blanchy. 2020. CAGS: Catalog of Agrogeophysical Studies. doi: 10.5281/zenodo.4058524.

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