傅里叶域n维插值的并行分层张量积方法

Hsin-Chia Chen, Hao Yang, Yu-Chieh Chao, Julian Nicholls, Jyh-Miin Lin, Chih-Ching Chen, Wei-Hsuan Yu, F. Hwang
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引用次数: 1

摘要

由于计算复杂度和空间复杂度增加等计算问题,复傅里叶域中的并行多维插值(也称为非均匀快速傅里叶变换)面临着重大挑战。例如,当代图形处理单元(GPU)受到相对较小的内存大小和不断增加的插补器大小的限制。这个问题使得多维傅里叶域插值成为问题,而在磁共振成像(MRI)或计算机断层扫描等工业应用中,寻找优化配置仍然是一个未解决的挑战。为了提高GPU上多维插值的性能,提出了一种新的并行分层张量积树方法。该方法在器件内存大小的限制下结合了复合一维插补器。GPU上的运行时性能随配置的不同而不同。最佳调优方法比离散GPU上的压缩稀疏行(CSR)快2.52 ~ 4.98倍,比集成GPU上的压缩稀疏行(CSR)快4.16 ~ 9.59倍。采用层次张量积插值法计算了多维非均匀快速傅里叶变换。在三维MRI重建中实现了30倍的加速。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A parallel hierarchical tensor product method for n-dimensional interpolation in the Fourier domain
Parallel multi-dimensional interpolation in the complex Fourier domain (also known as the non-uniform fast Fourier transform) encounters major challenges, due to computation issues such as increasing computation complexity and space complexity. For instance, the contemporary graphics processing unit (GPU) is limited by the relatively small memory size and the increasing size of the interpolator. This issue makes multidimensional Fourier domain interpolation problematic, while finding an optimized configuration remains an unsolved challenge in industrial applications, e.g. magnetic resonance imaging (MRI) or computerized tomography. To enhance the performance of multi-dimensional interpolation on GPU, a new parallel hierarchical tensor products tree approach is proposed. The method combines the composite 1D interpolators under the limitation imposed by the memory size of the device. The resultant run-time performance on the GPU varies with different configurations. The best-tuned method is 2.52-4.98× faster than the compressed sparse row (CSR) on the discrete GPU and 4.16-9.59× faster than CSR on the integrated GPU. The hierarchical tensor product interpolation is used to compute the multi-dimensional nonuniform fast Fourier transform. An acceleration of 30× was achieved in 3D MRI reconstruction.
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