{"title":"通过分解减少基因调控网络","authors":"Luonan Chen, Ruiqi Wang, K. Aihara","doi":"10.1109/CSBW.2005.117","DOIUrl":null,"url":null,"abstract":"This paper deals with the theoretical framework derived for gene regulatory networks with stochasticity. We exploit the fast-slow dynamics of biological systems to reduce the dimensionality, and take advantage of special interaction structure of fast-slow variables to simplify the mathematical model, which significantly reduce the complexity of gene networks. The numerical simulation also confirmed the effectiveness of our method, which can be applied to a large-scale quantitative simulation of cellular dynamics.","PeriodicalId":123531,"journal":{"name":"2005 IEEE Computational Systems Bioinformatics Conference - Workshops (CSBW'05)","volume":"9 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2005-08-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Reducing gene regulatory networks by decomposition\",\"authors\":\"Luonan Chen, Ruiqi Wang, K. Aihara\",\"doi\":\"10.1109/CSBW.2005.117\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"This paper deals with the theoretical framework derived for gene regulatory networks with stochasticity. We exploit the fast-slow dynamics of biological systems to reduce the dimensionality, and take advantage of special interaction structure of fast-slow variables to simplify the mathematical model, which significantly reduce the complexity of gene networks. The numerical simulation also confirmed the effectiveness of our method, which can be applied to a large-scale quantitative simulation of cellular dynamics.\",\"PeriodicalId\":123531,\"journal\":{\"name\":\"2005 IEEE Computational Systems Bioinformatics Conference - Workshops (CSBW'05)\",\"volume\":\"9 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2005-08-08\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"2005 IEEE Computational Systems Bioinformatics Conference - Workshops (CSBW'05)\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1109/CSBW.2005.117\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"2005 IEEE Computational Systems Bioinformatics Conference - Workshops (CSBW'05)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/CSBW.2005.117","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Reducing gene regulatory networks by decomposition
This paper deals with the theoretical framework derived for gene regulatory networks with stochasticity. We exploit the fast-slow dynamics of biological systems to reduce the dimensionality, and take advantage of special interaction structure of fast-slow variables to simplify the mathematical model, which significantly reduce the complexity of gene networks. The numerical simulation also confirmed the effectiveness of our method, which can be applied to a large-scale quantitative simulation of cellular dynamics.