病理性肿瘤分级空间与层次合作框架

Xiaotian Yu, Zunlei Feng, Xiuming Zhang, Yuexuan Wang, Thomas Li
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引用次数: 0

摘要

在临床上,病理图像对癌症的诊断是直观的,被认为是“金标准”。将深度学习应用于病理图像分析存在两个挑战:超大尺寸和噪声注释。病理图像通常包含数十亿像素,这是不适合正常的分类模型。此外,超大尺寸和混合的癌细胞迫使医生根据癌变程度粗略地划定病变区域的边界,这带来了两种噪声标签:空间噪声(标注不准确的癌变范围)和电平噪声(标注不准确的癌变程度)。基于以上发现,我们提出了基于噪声注释的病理性肿瘤分级的空间和层次合作框架,包括空间感知分支和层次感知分支。空间感知分支首先将超大图像转换为多层超像素(Multilayer Superpixel, MS)图,显著减小了图像尺寸并保留了全局特征。然后,采用全局到局部的整流策略来解决空间噪声。电平感知分支采用不同的分组核和一种新的分级损失函数来处理电平噪声。同时,两个分支机构通过相互补充各自缺失的功能来进行合作,共同应对上述两个挑战。大量的实验表明,使用噪声注释,所提出的框架在我们的HCC数据集和两个公共数据集上实现了SOTA性能。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Space and Level Cooperation Framework for Pathological Cancer Grading
Clinically, the pathological images are intuitive for cancer diagnosis and have been considered as the ‘gold standard’. There are two challenges for applying deep learning into the pathological images analysis: the ultra-large size and the noisy annotations. A pathological image usually contains billions of pixels, which is unsuitable for normal classification models. Furthermore, the ultra-large size and mixed cancerous cells compel the doctor to draw rough boundaries of lesion area according to the cancerous level, which brings two kinds of noisy labels: space noise (annotating inaccurate scope of cancerous area) and level noise (annotating inaccurate cancerous level). Based on the above findings, we propose the space and level cooperation framework, comprising a space-aware branch and a level-aware branch, for pathological cancer grading with noisy annotations. The space-aware branch first turns the ultra-large image into a Multilayer Superpixel (MS) graph, significantly reducing the size and preserving the global features. Then, a global-to-local rectifying strategy is adopted to solve the space noise. The level-aware branch adopts different grouped kernels and a novel grading loss function to handle level noise. Mean-while, two branches cooperate through complementing missing features of each other for handling the above two challenges. Extensive experiments demonstrate that with noisy annotations, the proposed framework achieves SOTA performance on our HCC dataset and two public datasets.
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