一种快速的分布式后缀数组生成算法

J. Kitajima, G. Navarro
{"title":"一种快速的分布式后缀数组生成算法","authors":"J. Kitajima, G. Navarro","doi":"10.1109/SPIRE.1999.796583","DOIUrl":null,"url":null,"abstract":"We present a distributed algorithm for suffix array generation, based on the sequential algorithm of U. Manber and E. Myers (1993). The sequential algorithm is O(nlogn) in the worst case and O(nloglogn) on average, where n is the text size. Using p processors connected through a high bandwidth network, we obtain O((n/p)loglogn) average time, which is an almost optimal speedup. Unlike previous algorithms, the text is not transmitted through the network and hence the messages exchanged are much smaller. We present some experimental evidence to show that the new algorithm can be faster than the sequential Manber & Myers counterpart.","PeriodicalId":131279,"journal":{"name":"6th International Symposium on String Processing and Information Retrieval. 5th International Workshop on Groupware (Cat. No.PR00268)","volume":"45 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"1999-09-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"12","resultStr":"{\"title\":\"A fast distributed suffix array generation algorithm\",\"authors\":\"J. Kitajima, G. Navarro\",\"doi\":\"10.1109/SPIRE.1999.796583\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"We present a distributed algorithm for suffix array generation, based on the sequential algorithm of U. Manber and E. Myers (1993). The sequential algorithm is O(nlogn) in the worst case and O(nloglogn) on average, where n is the text size. Using p processors connected through a high bandwidth network, we obtain O((n/p)loglogn) average time, which is an almost optimal speedup. Unlike previous algorithms, the text is not transmitted through the network and hence the messages exchanged are much smaller. We present some experimental evidence to show that the new algorithm can be faster than the sequential Manber & Myers counterpart.\",\"PeriodicalId\":131279,\"journal\":{\"name\":\"6th International Symposium on String Processing and Information Retrieval. 5th International Workshop on Groupware (Cat. No.PR00268)\",\"volume\":\"45 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"1999-09-21\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"12\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"6th International Symposium on String Processing and Information Retrieval. 5th International Workshop on Groupware (Cat. No.PR00268)\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1109/SPIRE.1999.796583\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"6th International Symposium on String Processing and Information Retrieval. 5th International Workshop on Groupware (Cat. No.PR00268)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/SPIRE.1999.796583","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 12

摘要

我们提出了一种基于U. Manber和E. Myers(1993)的顺序算法的后缀数组生成的分布式算法。在最坏的情况下,顺序算法是O(nlogn),平均是O(nloglog),其中n是文本大小。使用p个处理器通过高带宽网络连接,我们获得了O((n/p)loglog)的平均时间,这几乎是最优的加速。与以前的算法不同,文本不通过网络传输,因此交换的消息要小得多。我们提出了一些实验证据,表明新算法可以比顺序的Manber & Myers对应更快。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A fast distributed suffix array generation algorithm
We present a distributed algorithm for suffix array generation, based on the sequential algorithm of U. Manber and E. Myers (1993). The sequential algorithm is O(nlogn) in the worst case and O(nloglogn) on average, where n is the text size. Using p processors connected through a high bandwidth network, we obtain O((n/p)loglogn) average time, which is an almost optimal speedup. Unlike previous algorithms, the text is not transmitted through the network and hence the messages exchanged are much smaller. We present some experimental evidence to show that the new algorithm can be faster than the sequential Manber & Myers counterpart.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信