建立具有可识别参数的生物模型的局部敏感性分析方法:在l型钙通道建模中的应用

Anna Sher, Ken Wang, A. Wathen, Gary R. Mirams, D. Abramson, D. Gavaghan
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引用次数: 4

摘要

计算心脏模型为心脏功能的潜在机制提供了重要的见解。这些模型的参数估计是一个持续的挑战,因为许多现有的模型都是过度参数化的。灵敏度分析是研究参数可辨识性的重要工具。虽然现有的方法可以深入了解参数的重要性,但它们无法有效地识别冗余参数。我们提出了一种新的基于奇异值分解的算法来确定心脏模型的参数可识别性。利用这种局部敏感性方法,我们研究了Mahajan 2008兔心室肌细胞l型钙电流模型。我们识别了不重要的和冗余的参数,并通过将Ical模型减少到最小值来改进它,该模型被验证只有可识别的参数。新提出的方法为模型验证和评估心脏模型的预测能力提供了一种新的方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A Local Sensitivity Analysis Method for Developing Biological Models with Identifiable Parameters: Application to L-type Calcium Channel Modelling
Computational cardiac models provide important insights into the underlying mechanisms of heart function. Parameter estimation in these models is an ongoing challenge with many existing models being overparameterised. Sensitivity analysis presents a key tool for exploring the parameter identifiability. While existing methods provide insight into the significance of the parameters, they are unable to identify redundant parameters in an efficient manner. We present a new singular value decomposition based algorithm for determining parameter identifiability in cardiac models. Using this local sensitivity approach, we investigate the Mahajan 2008 rabbit ventricular myocyte L-type calcium current model. We identify non-significant and redundant parameters and improve the Ical model by reducing it to a minimum one that is validated to have only identifiable parameters. The newly proposed approach provides a new method for model validation and evaluation of the predictive power of cardiac models.
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