{"title":"低分辨率傅立叶合成的从头算相位","authors":"V. Lunin, A. Urzhumtsev, A. Podjarny","doi":"10.1107/97809553602060000852","DOIUrl":null,"url":null,"abstract":"Low-resolution phasing addresses the cases where experimental X-ray diffraction intensities are only available to a low-resolution limit, or when the standard phasing methods to solve macromolecular structures fail. Ab initio phasing is based on general properties of macromolecular objects (connectivity, electron-density histograms, likelihood of molecular masks etc.) and does not require extra diffraction experiments. The Monte Carlo phasing procedure includes generation of a large ‘population’ of trial solutions, enrichment of this population by filtering with selection criteria, clustering and averaging. The results of low-resolution phasing allow one to get information on the packing of particles in a crystal and on the shape (envelope) of the molecules, and to get an insight into the architecture of multidomain complexes. \n \n \nKeywords: \n \nlow-resolution phasing; \nab initio phasing; \nlow-resolution images; \nmultifiltering cyclic phasing procedure; \nmap connectivity; \nfew-atoms model; \nphase averaging; \nFourier synthesis; \ncluster analysis","PeriodicalId":338076,"journal":{"name":"International Tables for Crystallography","volume":"35 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2012-04-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"3","resultStr":"{\"title\":\"Ab initio phasing of low‐resolution Fourier syntheses\",\"authors\":\"V. Lunin, A. Urzhumtsev, A. Podjarny\",\"doi\":\"10.1107/97809553602060000852\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Low-resolution phasing addresses the cases where experimental X-ray diffraction intensities are only available to a low-resolution limit, or when the standard phasing methods to solve macromolecular structures fail. Ab initio phasing is based on general properties of macromolecular objects (connectivity, electron-density histograms, likelihood of molecular masks etc.) and does not require extra diffraction experiments. The Monte Carlo phasing procedure includes generation of a large ‘population’ of trial solutions, enrichment of this population by filtering with selection criteria, clustering and averaging. The results of low-resolution phasing allow one to get information on the packing of particles in a crystal and on the shape (envelope) of the molecules, and to get an insight into the architecture of multidomain complexes. \\n \\n \\nKeywords: \\n \\nlow-resolution phasing; \\nab initio phasing; \\nlow-resolution images; \\nmultifiltering cyclic phasing procedure; \\nmap connectivity; \\nfew-atoms model; \\nphase averaging; \\nFourier synthesis; \\ncluster analysis\",\"PeriodicalId\":338076,\"journal\":{\"name\":\"International Tables for Crystallography\",\"volume\":\"35 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2012-04-14\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"3\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"International Tables for Crystallography\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1107/97809553602060000852\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"International Tables for Crystallography","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1107/97809553602060000852","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Ab initio phasing of low‐resolution Fourier syntheses
Low-resolution phasing addresses the cases where experimental X-ray diffraction intensities are only available to a low-resolution limit, or when the standard phasing methods to solve macromolecular structures fail. Ab initio phasing is based on general properties of macromolecular objects (connectivity, electron-density histograms, likelihood of molecular masks etc.) and does not require extra diffraction experiments. The Monte Carlo phasing procedure includes generation of a large ‘population’ of trial solutions, enrichment of this population by filtering with selection criteria, clustering and averaging. The results of low-resolution phasing allow one to get information on the packing of particles in a crystal and on the shape (envelope) of the molecules, and to get an insight into the architecture of multidomain complexes.
Keywords:
low-resolution phasing;
ab initio phasing;
low-resolution images;
multifiltering cyclic phasing procedure;
map connectivity;
few-atoms model;
phase averaging;
Fourier synthesis;
cluster analysis