Pilar López Úbeda, Manuel Carlos Díaz Galiano, L. Ureña López, Maite Martin
{"title":"使用Snomed识别和索引化学和药物提及。","authors":"Pilar López Úbeda, Manuel Carlos Díaz Galiano, L. Ureña López, Maite Martin","doi":"10.18653/v1/D19-5718","DOIUrl":null,"url":null,"abstract":"In this paper we describe a new named entity extraction system. Our work proposes a system for the identification and annotation of drug names in Spanish biomedical texts based on machine learning and deep learning models. Subsequently, a standardized code using Snomed is assigned to these drugs, for this purpose, Natural Language Processing tools and techniques have been used, and a dictionary of different sources of information has been built. The results are promising, we obtain 78% in F1 score on the first sub-track and in the second task we map with Snomed correctly 72% of the found entities.","PeriodicalId":338917,"journal":{"name":"Proceedings of The 5th Workshop on BioNLP Open Shared Tasks","volume":"91 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Using Snomed to recognize and index chemical and drug mentions.\",\"authors\":\"Pilar López Úbeda, Manuel Carlos Díaz Galiano, L. Ureña López, Maite Martin\",\"doi\":\"10.18653/v1/D19-5718\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"In this paper we describe a new named entity extraction system. Our work proposes a system for the identification and annotation of drug names in Spanish biomedical texts based on machine learning and deep learning models. Subsequently, a standardized code using Snomed is assigned to these drugs, for this purpose, Natural Language Processing tools and techniques have been used, and a dictionary of different sources of information has been built. The results are promising, we obtain 78% in F1 score on the first sub-track and in the second task we map with Snomed correctly 72% of the found entities.\",\"PeriodicalId\":338917,\"journal\":{\"name\":\"Proceedings of The 5th Workshop on BioNLP Open Shared Tasks\",\"volume\":\"91 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"1900-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Proceedings of The 5th Workshop on BioNLP Open Shared Tasks\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.18653/v1/D19-5718\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Proceedings of The 5th Workshop on BioNLP Open Shared Tasks","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.18653/v1/D19-5718","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Using Snomed to recognize and index chemical and drug mentions.
In this paper we describe a new named entity extraction system. Our work proposes a system for the identification and annotation of drug names in Spanish biomedical texts based on machine learning and deep learning models. Subsequently, a standardized code using Snomed is assigned to these drugs, for this purpose, Natural Language Processing tools and techniques have been used, and a dictionary of different sources of information has been built. The results are promising, we obtain 78% in F1 score on the first sub-track and in the second task we map with Snomed correctly 72% of the found entities.