基于遗传算法优化神经网络的顺铂化疗疗效评价

A. Sahlol, Yasmine S. Moemen, A. Ewees, A. Hassanien
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引用次数: 11

摘要

顺铂是一种治疗多种癌症的有效药物;其作用是通过与细胞DNA相互作用而产生的遗传毒性表现出来的。患者基因表达预测是预测药物疗效的重要环节。在本文中,我们提出了一种基于遗传算法的优化神经网络(NNs)来评估顺铂作为化疗药物的有效性。该方法将实际基因与预测基因之间的误差最小化,直至达到神经网络的最小均方误差(MSE),从而提高了预测精度。我们使用了一个公共数据集(分为五个子数据集),其中的数据显示了顺铂、钠、氯化物和紫杉醇等不同化学物质的遗传毒性。仅使用顺铂作为DNA损伤的指标。遗传算法优化后的神经网络在所有子数据集上均实现了较低的均方差,预测精度较高。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Evaluation of cisplatin efficiency as a chemotherapeutic drug based on neural networks optimized by genetic algorithm
Cisplatin is an active drug against many types of cancers; its effect appears through genetic toxicity which caused by interaction with the DNA of the cell. The gene expressions prediction of the patients is a very vital process in estimating the drug response. In this paper, we proposed an optimized Neural Networks (NNs) by Genetic Algorithm (GA) for evaluation of cisplatin efficiency as a chemotherapeutic drug. The proposed approach minimizes the error between the actual and the predicted genes until reaching the minimum Mean Square Error (MSE) of NNs which accordingly, improve the prediction accuracy. We used a public dataset (divided into five sub-datasets), where that data demonstrated the genotoxicity of different chemicals like cisplatin, sodium, chloride, and taxol. It was used only cisplatin as an indicator of DNA damage. The prediction accuracy of the optimized NNs by GA was high as lower MSE achieved in all sub-datasets.
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