{"title":"基于HeteSim评分预测人类药物与靶标之间的关联","authors":"Le Wei, Fang Zheng","doi":"10.1109/CTISC52352.2021.00012","DOIUrl":null,"url":null,"abstract":"In the past decades, drug target prediction has attracted a lot of scholars' attention, and many classic algorithms and models have also been generated. We study from machine learning algorithms and construct a heterogeneous network of drug targets through data processing of biological networks. We construct a drug-drug-like network, a drug-target similar network, and a target-target similar network, and then integrate the above three networks into one heterogeneous network, and select two meta-paths in the heterogeneous network \"drug-drug-target\" path and the \"drug-target-target\" path, the normalized HeteSim scores for both paths were calculated, and the HeteSim scores for the two paths were integrated to obtain the final result. The drug-target interaction score (HDTA_HeteSim) is calculated based on different paths in heterogeneous networks, and the algorithm is applied to drug and target prediction. In addition, the AUC (area under the ROC curve) of the HDTA_HeteSim model in the leave-one-out cross-validation has a value of 0.9540, which achieves reliable prediction performance. We also used the DT-Hybrid method and the HDTA_HeteSim method to separately analyze the bromocriptine drug predictions, and found that our algorithm are more efficiency.","PeriodicalId":268378,"journal":{"name":"2021 3rd International Conference on Advances in Computer Technology, Information Science and Communication (CTISC)","volume":"71 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2021-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Predicting the Association Between Human Drugs and Targets based on HeteSim Score\",\"authors\":\"Le Wei, Fang Zheng\",\"doi\":\"10.1109/CTISC52352.2021.00012\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"In the past decades, drug target prediction has attracted a lot of scholars' attention, and many classic algorithms and models have also been generated. We study from machine learning algorithms and construct a heterogeneous network of drug targets through data processing of biological networks. We construct a drug-drug-like network, a drug-target similar network, and a target-target similar network, and then integrate the above three networks into one heterogeneous network, and select two meta-paths in the heterogeneous network \\\"drug-drug-target\\\" path and the \\\"drug-target-target\\\" path, the normalized HeteSim scores for both paths were calculated, and the HeteSim scores for the two paths were integrated to obtain the final result. The drug-target interaction score (HDTA_HeteSim) is calculated based on different paths in heterogeneous networks, and the algorithm is applied to drug and target prediction. In addition, the AUC (area under the ROC curve) of the HDTA_HeteSim model in the leave-one-out cross-validation has a value of 0.9540, which achieves reliable prediction performance. We also used the DT-Hybrid method and the HDTA_HeteSim method to separately analyze the bromocriptine drug predictions, and found that our algorithm are more efficiency.\",\"PeriodicalId\":268378,\"journal\":{\"name\":\"2021 3rd International Conference on Advances in Computer Technology, Information Science and Communication (CTISC)\",\"volume\":\"71 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2021-04-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"2021 3rd International Conference on Advances in Computer Technology, Information Science and Communication (CTISC)\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1109/CTISC52352.2021.00012\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"2021 3rd International Conference on Advances in Computer Technology, Information Science and Communication (CTISC)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/CTISC52352.2021.00012","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Predicting the Association Between Human Drugs and Targets based on HeteSim Score
In the past decades, drug target prediction has attracted a lot of scholars' attention, and many classic algorithms and models have also been generated. We study from machine learning algorithms and construct a heterogeneous network of drug targets through data processing of biological networks. We construct a drug-drug-like network, a drug-target similar network, and a target-target similar network, and then integrate the above three networks into one heterogeneous network, and select two meta-paths in the heterogeneous network "drug-drug-target" path and the "drug-target-target" path, the normalized HeteSim scores for both paths were calculated, and the HeteSim scores for the two paths were integrated to obtain the final result. The drug-target interaction score (HDTA_HeteSim) is calculated based on different paths in heterogeneous networks, and the algorithm is applied to drug and target prediction. In addition, the AUC (area under the ROC curve) of the HDTA_HeteSim model in the leave-one-out cross-validation has a value of 0.9540, which achieves reliable prediction performance. We also used the DT-Hybrid method and the HDTA_HeteSim method to separately analyze the bromocriptine drug predictions, and found that our algorithm are more efficiency.