{"title":"山茶天然化合物治疗非小细胞肺癌的分子对接研究","authors":"H. A. Hamzah, P.M. Afladhanti, M.D. Romadhan","doi":"10.32539/sjm.v5i1.128","DOIUrl":null,"url":null,"abstract":"Cancer is one of the biggest health problems with lung cancer as the first rank in the number of new cases and deaths. Non-small cell lung carcinoma (NSCLC) is a type of lung cancer which accounts for about 85% cases. Previous research identified the role of epidermal growth factor receptor (EGFR) as the most suitable target to treat NSCLC. This study used a molecular docking technique to identify the potential compounds derived from Camellia sinensis (green tea) leaves as therapeutic agent to treat NSCLC. We tested 12 compounds in green tea leaves along with gefitinib as a comparative drug. Docking was carried out on EGFR as receptor target by Autodock Tools and Autodock Vina. Molecular interactions were visualized by Discovery Studio v16. All compounds met the criteria as drugs based on Lipinski’s solubility test and were safe to use based on toxicity test with AdmetSAR. Docking results showed that all compounds had affinity to EGFR receptor. Catechin and myricetin had the same energy bonds as gefitinib which were -7,9 kcal/mol, while theaflavin gallate, theaflavin digallate, epicatechin gallate, epigallocatechin-3-gallate, catechin gallate, thearubigin, quercetin, and kaempferol were proven to have the strongest binding energy compared to gefitinib which were -10.6, -9.8, -8.9, -8.9, -8.5, -8.3, -8.0, and -8.0 kcal/mol, respectively. All compounds have the potential for development into drugs for NSCLC treatment. Further in vitro and in vivo investigations are needed to bring these compounds to the clinical setting.","PeriodicalId":252478,"journal":{"name":"Sriwijaya Journal of Medicine","volume":"238 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2022-01-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":"{\"title\":\"Natural Compounds Derived from Camellia sinensis as Therapeutic Agent to Treat Non-Small Cell Lung Carcinoma (NSCLC): A Molecular Docking Study\",\"authors\":\"H. A. Hamzah, P.M. Afladhanti, M.D. Romadhan\",\"doi\":\"10.32539/sjm.v5i1.128\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Cancer is one of the biggest health problems with lung cancer as the first rank in the number of new cases and deaths. Non-small cell lung carcinoma (NSCLC) is a type of lung cancer which accounts for about 85% cases. Previous research identified the role of epidermal growth factor receptor (EGFR) as the most suitable target to treat NSCLC. This study used a molecular docking technique to identify the potential compounds derived from Camellia sinensis (green tea) leaves as therapeutic agent to treat NSCLC. We tested 12 compounds in green tea leaves along with gefitinib as a comparative drug. Docking was carried out on EGFR as receptor target by Autodock Tools and Autodock Vina. Molecular interactions were visualized by Discovery Studio v16. All compounds met the criteria as drugs based on Lipinski’s solubility test and were safe to use based on toxicity test with AdmetSAR. Docking results showed that all compounds had affinity to EGFR receptor. Catechin and myricetin had the same energy bonds as gefitinib which were -7,9 kcal/mol, while theaflavin gallate, theaflavin digallate, epicatechin gallate, epigallocatechin-3-gallate, catechin gallate, thearubigin, quercetin, and kaempferol were proven to have the strongest binding energy compared to gefitinib which were -10.6, -9.8, -8.9, -8.9, -8.5, -8.3, -8.0, and -8.0 kcal/mol, respectively. All compounds have the potential for development into drugs for NSCLC treatment. Further in vitro and in vivo investigations are needed to bring these compounds to the clinical setting.\",\"PeriodicalId\":252478,\"journal\":{\"name\":\"Sriwijaya Journal of Medicine\",\"volume\":\"238 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2022-01-24\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Sriwijaya Journal of Medicine\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.32539/sjm.v5i1.128\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Sriwijaya Journal of Medicine","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.32539/sjm.v5i1.128","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 1
摘要
癌症是最大的健康问题之一,肺癌在新病例和死亡人数中排名第一。非小细胞肺癌(NSCLC)是肺癌的一种,约占85%。既往研究发现表皮生长因子受体(EGFR)是治疗非小细胞肺癌最合适的靶点。本研究采用分子对接技术,从茶树(绿茶)叶中鉴定出可能作为非小细胞肺癌治疗剂的化合物。我们测试了绿茶中的12种化合物以及吉非替尼作为比较药物。通过Autodock Tools和Autodock Vina对EGFR受体靶点进行对接。通过Discovery Studio v16可视化分子相互作用。根据利平斯基溶解度试验,所有化合物符合药物标准,根据AdmetSAR毒性试验,所有化合物使用安全。对接结果表明,所有化合物均与EGFR受体有亲和力。儿茶素和杨梅素的结合能与吉非替尼相同,分别为-7、9 kcal/mol,而茶黄素没食子酸酯、茶黄素二没食子酸酯、表儿茶素没食子儿茶素-3-没食子酸酯、儿茶素没食子酸酯、茶红素、槲皮素和山奈酚的结合能较吉非替尼最强,分别为-10.6、-9.8、-8.9、-8.9、-8.5、-8.3、-8.0和-8.0 kcal/mol。所有化合物都有潜力发展成为治疗非小细胞肺癌的药物。进一步的体外和体内研究需要将这些化合物带到临床环境。
Natural Compounds Derived from Camellia sinensis as Therapeutic Agent to Treat Non-Small Cell Lung Carcinoma (NSCLC): A Molecular Docking Study
Cancer is one of the biggest health problems with lung cancer as the first rank in the number of new cases and deaths. Non-small cell lung carcinoma (NSCLC) is a type of lung cancer which accounts for about 85% cases. Previous research identified the role of epidermal growth factor receptor (EGFR) as the most suitable target to treat NSCLC. This study used a molecular docking technique to identify the potential compounds derived from Camellia sinensis (green tea) leaves as therapeutic agent to treat NSCLC. We tested 12 compounds in green tea leaves along with gefitinib as a comparative drug. Docking was carried out on EGFR as receptor target by Autodock Tools and Autodock Vina. Molecular interactions were visualized by Discovery Studio v16. All compounds met the criteria as drugs based on Lipinski’s solubility test and were safe to use based on toxicity test with AdmetSAR. Docking results showed that all compounds had affinity to EGFR receptor. Catechin and myricetin had the same energy bonds as gefitinib which were -7,9 kcal/mol, while theaflavin gallate, theaflavin digallate, epicatechin gallate, epigallocatechin-3-gallate, catechin gallate, thearubigin, quercetin, and kaempferol were proven to have the strongest binding energy compared to gefitinib which were -10.6, -9.8, -8.9, -8.9, -8.5, -8.3, -8.0, and -8.0 kcal/mol, respectively. All compounds have the potential for development into drugs for NSCLC treatment. Further in vitro and in vivo investigations are needed to bring these compounds to the clinical setting.