B. Wajid, A. R. Ekti, Amina Noor, E. Serpedin, M. N. Ayyaz, H. Nounou, M. Nounou
{"title":"超音速MiB","authors":"B. Wajid, A. R. Ekti, Amina Noor, E. Serpedin, M. N. Ayyaz, H. Nounou, M. Nounou","doi":"10.1109/GENSIPS.2013.6735941","DOIUrl":null,"url":null,"abstract":"A novel assembly pipeline, MiB, employs Minimum Description Length (MDL), de-Bruijn graphs and Bayesian estimation for reference assisted assembly of the novel genome. In a previous study MiB assembly was compared with nine other assembly algorithms showing significant improvement in results coupled with very large execution times. This correspondence introduces `Supersonic MiB', an extension to our previous study MiB. Supersonic MiB aims to stimulate the assembly pipeline of MiB showing significant improvement in execution time compared to its predecessor.","PeriodicalId":336511,"journal":{"name":"2013 IEEE International Workshop on Genomic Signal Processing and Statistics","volume":"12 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2013-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"3","resultStr":"{\"title\":\"Supersonic MiB\",\"authors\":\"B. Wajid, A. R. Ekti, Amina Noor, E. Serpedin, M. N. Ayyaz, H. Nounou, M. Nounou\",\"doi\":\"10.1109/GENSIPS.2013.6735941\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"A novel assembly pipeline, MiB, employs Minimum Description Length (MDL), de-Bruijn graphs and Bayesian estimation for reference assisted assembly of the novel genome. In a previous study MiB assembly was compared with nine other assembly algorithms showing significant improvement in results coupled with very large execution times. This correspondence introduces `Supersonic MiB', an extension to our previous study MiB. Supersonic MiB aims to stimulate the assembly pipeline of MiB showing significant improvement in execution time compared to its predecessor.\",\"PeriodicalId\":336511,\"journal\":{\"name\":\"2013 IEEE International Workshop on Genomic Signal Processing and Statistics\",\"volume\":\"12 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2013-11-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"3\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"2013 IEEE International Workshop on Genomic Signal Processing and Statistics\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1109/GENSIPS.2013.6735941\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"2013 IEEE International Workshop on Genomic Signal Processing and Statistics","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/GENSIPS.2013.6735941","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
A novel assembly pipeline, MiB, employs Minimum Description Length (MDL), de-Bruijn graphs and Bayesian estimation for reference assisted assembly of the novel genome. In a previous study MiB assembly was compared with nine other assembly algorithms showing significant improvement in results coupled with very large execution times. This correspondence introduces `Supersonic MiB', an extension to our previous study MiB. Supersonic MiB aims to stimulate the assembly pipeline of MiB showing significant improvement in execution time compared to its predecessor.
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