基于两个连续残基纠缠相关的一种测量方法的新序列比对

2010 3rd International Symposium on Applied Sciences in Biomedical and Communication Technologies (ISABEL 2010) Pub Date : 2010-11-01 DOI:10.1109/ISABEL.2010.5702920

Toshihide Hara, Keiko Sato, M. Ohya

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引用次数: 1

摘要

我们通过在两个连续残基中引入纠缠相关的测量，开发了一种新的序列比对方法，称为MTRAP。结果表明，该方法可以提高对准精度。在PREFAB 4.0的基准测试中，我们的方法与ClustalW2、TCoffee、MAFFT等方法相比，获得了最高的排名。

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New sequence alignment by a measure due to entangled correlation in two consecutive residues

We develop a new sequence alignment called MTRAP by introducing a measure due to entangled correlation in two consecutive residues. We showed that the alignment accuracy could be improved by our approach. In the benchmark test by PREFAB 4.0, our method achieves the highest ranking compared with other methods such as ClustalW2, TCoffee and MAFFT.

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来源期刊

2010 3rd International Symposium on Applied Sciences in Biomedical and Communication Technologies (ISABEL 2010)

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