Mitsuru Funakoshi, Yuto Nakashima, Shunsuke Inenaga, H. Bannai, M. Takeda, A. Shinohara
{"title":"检测k-(次)节奏和等距子序列出现","authors":"Mitsuru Funakoshi, Yuto Nakashima, Shunsuke Inenaga, H. Bannai, M. Takeda, A. Shinohara","doi":"10.4230/LIPIcs.CPM.2020.12","DOIUrl":null,"url":null,"abstract":"The equidistant subsequence pattern matching problem is considered. Given a pattern string $P$ and a text string $T$, we say that $P$ is an \\emph{equidistant subsequence} of $T$ if $P$ is a subsequence of the text such that consecutive symbols of $P$ in the occurrence are equally spaced. We can consider the problem of equidistant subsequences as generalizations of (sub-)cadences. We give bit-parallel algorithms that yield $o(n^2)$ time algorithms for finding $k$-(sub-)cadences and equidistant subsequences. Furthermore, $O(n\\log^2 n)$ and $O(n\\log n)$ time algorithms, respectively for equidistant and Abelian equidistant matching for the case $|P| = 3$, are shown. The algorithms make use of a technique that was recently introduced which can efficiently compute convolutions with linear constraints.","PeriodicalId":236737,"journal":{"name":"Annual Symposium on Combinatorial Pattern Matching","volume":"70 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2020-02-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":"{\"title\":\"Detecting k-(Sub-)Cadences and Equidistant Subsequence Occurrences\",\"authors\":\"Mitsuru Funakoshi, Yuto Nakashima, Shunsuke Inenaga, H. Bannai, M. Takeda, A. Shinohara\",\"doi\":\"10.4230/LIPIcs.CPM.2020.12\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"The equidistant subsequence pattern matching problem is considered. Given a pattern string $P$ and a text string $T$, we say that $P$ is an \\\\emph{equidistant subsequence} of $T$ if $P$ is a subsequence of the text such that consecutive symbols of $P$ in the occurrence are equally spaced. We can consider the problem of equidistant subsequences as generalizations of (sub-)cadences. We give bit-parallel algorithms that yield $o(n^2)$ time algorithms for finding $k$-(sub-)cadences and equidistant subsequences. Furthermore, $O(n\\\\log^2 n)$ and $O(n\\\\log n)$ time algorithms, respectively for equidistant and Abelian equidistant matching for the case $|P| = 3$, are shown. The algorithms make use of a technique that was recently introduced which can efficiently compute convolutions with linear constraints.\",\"PeriodicalId\":236737,\"journal\":{\"name\":\"Annual Symposium on Combinatorial Pattern Matching\",\"volume\":\"70 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2020-02-17\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Annual Symposium on Combinatorial Pattern Matching\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.4230/LIPIcs.CPM.2020.12\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Annual Symposium on Combinatorial Pattern Matching","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.4230/LIPIcs.CPM.2020.12","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Detecting k-(Sub-)Cadences and Equidistant Subsequence Occurrences
The equidistant subsequence pattern matching problem is considered. Given a pattern string $P$ and a text string $T$, we say that $P$ is an \emph{equidistant subsequence} of $T$ if $P$ is a subsequence of the text such that consecutive symbols of $P$ in the occurrence are equally spaced. We can consider the problem of equidistant subsequences as generalizations of (sub-)cadences. We give bit-parallel algorithms that yield $o(n^2)$ time algorithms for finding $k$-(sub-)cadences and equidistant subsequences. Furthermore, $O(n\log^2 n)$ and $O(n\log n)$ time algorithms, respectively for equidistant and Abelian equidistant matching for the case $|P| = 3$, are shown. The algorithms make use of a technique that was recently introduced which can efficiently compute convolutions with linear constraints.