Differential transcendence criteria for second-order linear difference equations and elliptic hypergeometric functions

We develop general criteria that ensure that any non-zero solution of a given second-order difference equation is differentially transcendental, which apply uniformly in particular cases of interest, such as shift difference equations, q-dilation difference equations, Mahler difference equations, and elliptic difference equations. These criteria are obtained as an application of differential Galois theory for difference equations. We apply our criteria to prove a new result to the effect that most elliptic hypergeometric functions are differentially transcendental.