哈茨木霉纤维素酶基因的分子克隆。

Sibtain Ahmed, N. Aslam, F. Latif, M. Rajoka, A. Jamil
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引用次数: 30

摘要

纤维素酶是利用农工废弃物的重要来源。Exoglucanase (EC);3.2.1.91),内切葡聚糖酶(EC。3.2.1.4)和β葡萄糖苷酶(EC。3.2.1.21)从哈兹木霉E-58菌株中分离得到。真菌在沃格尔的培养基上生长,培养基中含有不同的碳源。在28℃,pH 5.5, 120转/分连续振荡5天的条件下,酶的产量达到最大。葡萄糖抑制酶的合成,而羧甲基纤维素(CMC)产生大量的酶。纤维素酶(外葡聚糖酶、内切葡聚糖酶和β-葡萄糖苷酶)的最大活性分别为2.764、14.4和0.629IU mL。利用RTPCR技术分离纤维素酶相关基因。从生长在CMC和木聚糖上的哈兹霉菌丝体中分离到RNA。用oligo dT(18)引物合成cDNA首链,用特异引物进行PCR。扩增产物经琼脂糖凝胶电泳纯化,连接到pUC18的smi位点。将含有exg、egl和bgl基因的质粒转化到大肠杆菌中进一步鉴定。尽管国际社会不再专注于化石燃料短缺,但仍有相当多的研究和开发旨在理解和商业化纤维素的酶解[1]。纤维素是地球上最丰富的有机聚合物,与糖和淀粉一起是重要的可再生能源[2]。纤维素原料的能源生产涉及到其水解成葡萄糖。高度有序的纤维素底物只有在外葡聚糖酶、内葡聚糖酶和β-葡萄糖苷酶以适当比例同时存在于溶液中时才能转化为可溶性糖。许多真菌种类都以生产纤维素酶而闻名,如黑曲霉(Aspergillus niger)、Sporotrichum spp、嗜热毛菌(Chaetomium thermoophilum)、木霉(Trichoderma)等[3]。基因克隆最近被用于研究一些酶和蛋白质的结构和功能及其过度表达。与其他传统方法相比,人们发现这种策略非常有效。本研究旨在确定提高纤维素酶产量的布局策略。本文报道了哈氏梭菌E-58株纤维素酶基因(exg、egl和bgl)的分离和克隆。材料与方法哈兹木霉(E58)在Vogel’s培养基(0.5%柠檬酸三钠,0.5% KH2PO4.0.2% NH4NO3, 0.4% (NH4)2SO4, 0.02%)中28℃、120 rpm摇培养
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Molecular cloning of cellulase genes from Trichoderma harzianum.
Cellulases are attractive source for utilization of the agro-industrial waste materials. Exoglucanase (EC; 3.2.1.91), Endoglucanase (EC. 3.2.1.4) and βglucosidase (EC. 3.2.1.21) were isolated from Trichoderma harzianum (E-58 strain). The fungus was grown on Vogel's medium with different carbon sources. Maximal production of the enzymes was achieved at 28 C, pH 5.5 under continuous shaking at 120 rpm for 5 days. Glucose repressed the synthesis of the enzymes whereas carboxymethylcellulose (CMC) produced the enzymes in substantial amounts. Maximum activity of cellulases (exoglucanase, endoglucanase and β-glucosidase) were found to be 2.764, 14.4 and 0.629IU mL, respectively. Corresponding genes for cellulases were isolated with the help of RTPCR. RNA was isolated from mycelia of T. harzianum grown on CMC and xylan. First strand of cDNA was synthesized using oligo dT (18) primer and subjected to PCR with specific primers. The amplified products were purified through agarose gel electrophoresis and ligated into SmaI site of pUC18. The plasmids containing exg, egl and bgl genes were transformed into E. coli for further characterization. INTRODUCTION Despite the fact that the world community is no longer pre-occupied with fossil fuel shortage, there is still a considerable research and development directed towards understanding and commercializing enzymatic hydrolysis of cellulose [1]. Cellulose is the most abundant organic polymer in this planet and is an important renewable energy source along with sugars and starches [2]. Energy production from cellulosic raw material involves its hydrolysis into glucose. Highly ordered cellulose substrates are converted into soluble sugars only when exoglucanase, endoglucanase and β-glucosidase are present in solution simultaneously in right proportion. A number of fungal species are known for the production of cellulases such as Aspergillus niger, Sporotrichum spp, Chaetomium thermophile, Trichoderma species etc [3]. Gene cloning is recently being employed for studying the structure and function of a number of enzymes and proteins and their over expression. This strategy has been found very efficient as compared to other traditional methods. Present study was designed to layout strategy for enhanced production of cellulases. In this paper we have reported the isolation and cloning of cellulase genes (exg ,egl and bgl) from T.harzianum (E-58 strain). MATERIALS AND METHODS Growth Conditions and Enzyme Assay Trichoderma harzianum (E58) was grown at 28C with shaking at 120 rpm in Vogel's medium (0.5% Trisodium citrate, 0.5% KH2PO4.0.2% NH4NO3, 0.4% (NH4)2SO4, 0.02%
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