将生命科学应用纳入下一代千万亿次浮点运算系统的架构优化

David A. Bader, Vipin Sachdeva
{"title":"将生命科学应用纳入下一代千万亿次浮点运算系统的架构优化","authors":"David A. Bader, Vipin Sachdeva","doi":"10.1109/CSBW.2005.77","DOIUrl":null,"url":null,"abstract":"Advances in experimental techniques have transformed biology into a data-intensive science, with a rapid explosion of data at the genomic and proteomic level. Few comprehensive suites of computationally-intensive life science applications are available to the computer science community for optimization of current high-performance architectures specifically targeted towards the computational biology applications. BioSplash represents a wide variety of open-source codes spanning the heterogeneity of algorithms, biological problems, popularity among biologists, and memory traits, gearing the suite to be of importance to both biologists and computer scientists.","PeriodicalId":123531,"journal":{"name":"2005 IEEE Computational Systems Bioinformatics Conference - Workshops (CSBW'05)","volume":"68 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2005-08-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"3","resultStr":"{\"title\":\"Incorporating life sciences applications in the architectural optimizations of next-generation petaflop-system\",\"authors\":\"David A. Bader, Vipin Sachdeva\",\"doi\":\"10.1109/CSBW.2005.77\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Advances in experimental techniques have transformed biology into a data-intensive science, with a rapid explosion of data at the genomic and proteomic level. Few comprehensive suites of computationally-intensive life science applications are available to the computer science community for optimization of current high-performance architectures specifically targeted towards the computational biology applications. BioSplash represents a wide variety of open-source codes spanning the heterogeneity of algorithms, biological problems, popularity among biologists, and memory traits, gearing the suite to be of importance to both biologists and computer scientists.\",\"PeriodicalId\":123531,\"journal\":{\"name\":\"2005 IEEE Computational Systems Bioinformatics Conference - Workshops (CSBW'05)\",\"volume\":\"68 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2005-08-08\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"3\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"2005 IEEE Computational Systems Bioinformatics Conference - Workshops (CSBW'05)\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1109/CSBW.2005.77\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"2005 IEEE Computational Systems Bioinformatics Conference - Workshops (CSBW'05)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/CSBW.2005.77","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 3

摘要

实验技术的进步已经将生物学转变为数据密集型科学,基因组和蛋白质组学水平的数据迅速爆炸。对于计算机科学界来说,很少有全面的计算密集型生命科学应用套件可以用于优化当前针对计算生物学应用的高性能架构。BioSplash代表了各种各样的开源代码,涵盖了算法、生物学问题、生物学家之间的流行和记忆特征的异质性,使该套件对生物学家和计算机科学家都很重要。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Incorporating life sciences applications in the architectural optimizations of next-generation petaflop-system
Advances in experimental techniques have transformed biology into a data-intensive science, with a rapid explosion of data at the genomic and proteomic level. Few comprehensive suites of computationally-intensive life science applications are available to the computer science community for optimization of current high-performance architectures specifically targeted towards the computational biology applications. BioSplash represents a wide variety of open-source codes spanning the heterogeneity of algorithms, biological problems, popularity among biologists, and memory traits, gearing the suite to be of importance to both biologists and computer scientists.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信