一种新颖的实验室版本管理系统,用于跟踪复杂的生物实验

William M. Shui, N. Lam, R. Wong
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引用次数: 5

摘要

能够跟踪各种生物实验的记录,以便将来对当前实验和其他非实验实验室程序进行验证。随着以XML格式发布生物数据的日益流行,出现了控制和管理这些数据的需求,以及将这些数据动态导出为各种格式以用于报告的需求。由于这些数据不断变化,用户希望能够查询以前的版本,从历史记录中绘制跨不同版本的数据,查询文档中的更改,以及有效地检索特定的文档版本。本文提出了一种基于xml的版本管理系统,可以有效、有意义地跟踪和分析实验室实验数据。这包括从基因组学、蛋白质组学和蛋白质结构的实验。我们还介绍了将非XML数据导入系统以及以多种格式动态生成报告的方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A novel laboratory version management system for tracking complex biological experiments
Ability to keep track of records for various biological experiments allows for future validation of the current experiments and other non-experimental laboratory procedures. With the increasing popularity of publishing biological data in XML format, there arises the need for the control and management of this data, as well as dynamically exporting this data to various formats for reporting purposes. As such data is constantly changing, users want to be able to query previous versions, plotting data across different versions from history, query changes in documents, as well as to retrieve a particular document version efficiently. This paper proposes an XML-based version management system for tracking and analyzing data obtained from any laboratory experiments in an effective and meaningful manner. This includes experiments ranging from genomic, proteomic and protein structural. We also present methods for importing non XML data into the system as well as generating reports in multiple formats dynamically.
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