Tianming Liu, Jianfeng Lu, Jingxin Nie, Gang Li, Hui Yan, Jingyu Yang, Lei Guo, W. Xia, Stephen T. C. Wong
{"title":"基于改进圆形霍夫变换的斑马鱼细胞/神经元定量","authors":"Tianming Liu, Jianfeng Lu, Jingxin Nie, Gang Li, Hui Yan, Jingyu Yang, Lei Guo, W. Xia, Stephen T. C. Wong","doi":"10.1109/LSSA.2006.250413","DOIUrl":null,"url":null,"abstract":"Microscopic imaging has become a critical step in the analysis of zebrafish phenotype, but tremendous amount of images generated from large number of embryos have become a bottleneck of data interpretation. The availability of an image informatics pipeline will be a significant step towards achieving reproducible quantitation of zebrafish phenotypes in scientific research and high-throughput screening. This paper presents an automated algorithm based on modified circular Hough transform for quantitation of zebrafish cells and neurons in microscopy imaging. Experimental results of three datasets are shown to demonstrate the performance of the algorithm. This algorithm has been integrated into our CBI Platform","PeriodicalId":360097,"journal":{"name":"2006 IEEE/NLM Life Science Systems and Applications Workshop","volume":"163 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2006-07-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":"{\"title\":\"Zebrafish Cell/Neuron Quantitation by Modified Circular Hough Transform\",\"authors\":\"Tianming Liu, Jianfeng Lu, Jingxin Nie, Gang Li, Hui Yan, Jingyu Yang, Lei Guo, W. Xia, Stephen T. C. Wong\",\"doi\":\"10.1109/LSSA.2006.250413\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Microscopic imaging has become a critical step in the analysis of zebrafish phenotype, but tremendous amount of images generated from large number of embryos have become a bottleneck of data interpretation. The availability of an image informatics pipeline will be a significant step towards achieving reproducible quantitation of zebrafish phenotypes in scientific research and high-throughput screening. This paper presents an automated algorithm based on modified circular Hough transform for quantitation of zebrafish cells and neurons in microscopy imaging. Experimental results of three datasets are shown to demonstrate the performance of the algorithm. This algorithm has been integrated into our CBI Platform\",\"PeriodicalId\":360097,\"journal\":{\"name\":\"2006 IEEE/NLM Life Science Systems and Applications Workshop\",\"volume\":\"163 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2006-07-13\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"2006 IEEE/NLM Life Science Systems and Applications Workshop\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1109/LSSA.2006.250413\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"2006 IEEE/NLM Life Science Systems and Applications Workshop","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/LSSA.2006.250413","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Zebrafish Cell/Neuron Quantitation by Modified Circular Hough Transform
Microscopic imaging has become a critical step in the analysis of zebrafish phenotype, but tremendous amount of images generated from large number of embryos have become a bottleneck of data interpretation. The availability of an image informatics pipeline will be a significant step towards achieving reproducible quantitation of zebrafish phenotypes in scientific research and high-throughput screening. This paper presents an automated algorithm based on modified circular Hough transform for quantitation of zebrafish cells and neurons in microscopy imaging. Experimental results of three datasets are shown to demonstrate the performance of the algorithm. This algorithm has been integrated into our CBI Platform
求助内容：
应助结果提醒方式：
京公网安备 11010802042870号
