选择性聚腺苷化位点的组织特异性分析

W. Qin
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引用次数: 0

摘要

基因表达的研究已成为探索复杂生命现象的有效途径,而信使RNA多聚腺苷化是真核生物基因表达过程中非常重要的一步。在这个过程中,有一个重要的生物学过程被称为聚腺苷化,在这个过程中形成聚腺苷化位点(poly(A) sites),通常标志着转录物的末端和基因的末端。有些基因有多个聚(A)位点。在这种情况下,我们称这些聚腺苷化位点为选择性聚腺苷化位点(APA位点)。APA位点在真核生物转录过程和生物复杂性研究中发挥着重要作用。APA位点在不同组织中的使用是不同的,组织特异性的分析也可以帮助我们进一步探索其生物学功能。因此,本文主要对APA位点进行组织特异性分析,通过信息熵和广义线性混合效应模型获得组织特异性位点,并对这些位点进行进一步分析。我们通过本文的方法有效筛选了组织特异性的APA位点,这些APA位点对聚腺苷化的研究有很大的帮助。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Analysis of tissue specificity of alternative polyadenylation sites
The study of gene expression has become an effective way to explore complex life phenomena, and messenger RNA polyadenylation is a very important step in the process of eukaryotic gene expression. In this session, there is an important biological process called polyadenylation, in which polyadenylation sites (poly(A) sites) are formed, which usually mark the end of the transcript and the end of the gene. Some genes have multiple poly(A) sites. In this case, we call these polyadenylation sites Alternative polyadenylation sites (APA sites). APA sites play an important role in the study of eukaryotic transcription process and biological complexity. APA sites are used differently in different tissues, and the analysis of tissue specificity can also help us further explore biological functions. Therefore, this paper mainly conducts tissue-specific analysis on APA sites, obtains tissue-specific sites through information entropy and generalized linear mixed effect models, and further analyzes these sites. We have effectively screened tissue-specific APA sites through the method in this paper, and these APA sites are of great help to the study of polyadenylation.
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