在已建立的计算化学软件包中实现持续集成软件

Robin M. Betz, R. Walker
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引用次数: 7

摘要

持续集成是快速和自动化开发和测试的软件工程原则。我们确定了持续集成的几个关键点,并通过讨论这些原则与AMBER(一个大型且广泛使用的分子动力学软件包)的实现和相关性,展示了它们如何与计算科学项目的需求相关。持续集成服务器的使用既改善了全球分布的AMBER开发人员之间的协作和沟通,也使单个开发人员自己获取的耗时的故障和基准信息实时可用。目前可用的持续集成服务器是针对软件工程社区的,很难适应计算科学项目的需要,然而,正如本文所展示的那样,由于发现了罕见的错误,并且来自地理上分散的研究人员的贡献被统一到一个易于访问的基于web的界面中,因此努力的回报可以很快。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Implementing continuous integration software in an established computational chemistry software package
Continuous integration is the software engineering principle of rapid and automated development and testing. We identify several key points of continuous integration and demonstrate how they relate to the needs of computational science projects by discussing the implementation and relevance of these principles to AMBER, a large and widely used molecular dynamics software package. The use of a continuous integration server has both improved collaboration and communication between AMBER developers, who are globally distributed, as well as making failure and benchmark information that would be time consuming for individual developers to obtain by themselves, available in real time. Continuous integration servers currently available are aimed at the software engineering community and can be difficult to adapt to the needs of computational science projects, however as demonstrated in this paper the effort payoff can be rapid since uncommon errors are found and contributions from geographically separated researchers are unified into one easily-accessible web-based interface.
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