评估刚果民主共和国西部木薯根坏死病(crnd)的严重程度和发病率

Bakelana Zeyimo, J. Pita, Mwangu Kuhima, Tevo Ndomateso, Mayanza Kingolo, Betezi Makuka, Tuwizana Nsimba, Mukendi Tshizembe, Tshiamala Ngeleka, Mahungu Nzola Meso, M. Godefroid, L. Munseki, T. Kanana, K. Mbuyi
{"title":"评估刚果民主共和国西部木薯根坏死病(crnd)的严重程度和发病率","authors":"Bakelana Zeyimo, J. Pita, Mwangu Kuhima, Tevo Ndomateso, Mayanza Kingolo, Betezi Makuka, Tuwizana Nsimba, Mukendi Tshizembe, Tshiamala Ngeleka, Mahungu Nzola Meso, M. Godefroid, L. Munseki, T. Kanana, K. Mbuyi","doi":"10.35410/ijaeb.2019.4477","DOIUrl":null,"url":null,"abstract":"Cassava is the staple food in the Democratic Republic of Congo (DRC) where both the roots and leaves are consumed. This crop is susceptible to several viral diseases, including Cassava Mosaic Disease(CMD) and Cassava Brown Streak Disease(CBSD) in eastern DRC. Following earlier studies that show root necrosis occurring in western DR Care not due to CBSD but to Cassava Root Necrosis Disease (CRND), an exploratory survey was conducted in western DRC from 2016 to 2017 in order to determine the distribution, the severity and the incidence of this disease (previously known as CBSD-like disease). NGS ( Next Generation Sequencing) results confirmed all the previous negative results obtained using PCR and CBSV primers. This suggests that microorganisms such as bacteria or fungi could be responsible for cassava root necrosis in western DRC and is not CBSD as predicted. Five provinces (Bas-Congo, Kinshasa, Bandundu, Equateur and Kasai-Oriental) were surveyed and data were collected according to the harmonized protocols adopted by countries within the West African Virus Epidemiology (WAVE) project. Statistical tests (ANOVA) performed on our data showed that CRND severity did not vary significantly among the provinces of Kinshasa, Bandundu and Bas-Congo which are the areas most affected by the disease. Bas-Congo and Kinshasa provinces presented the highest maximum disease severity (score 3 and 5 respectively), while Equateur province had the lowest disease severity score. Equateur province also had the highest percentage of healthy plants and few plants presented mild symptoms. The overall average of cassava root necrosis severity in western DRC ranged around 1.88 ± 0.08, an approximate score of 2. The overall mean incidence of CRND in western DRC was 22.24 ± 2.4% but reached 100% in localities considered as hotspots (Lukuakua in Bas-Congo and Nguma in Plateau des Batékés). The behaviour of cassava varieties against CRND is similar with CBSD in East Africa, most of improved varieties and landraces are susceptible to both diseases. Correlation analyses showed a positive correlation (r = 0.6940) between severity and incidence of CRND. Therefore, Bas-Congo province is the most affected province, while the province of Equateur is the least affected province in western DRC. Further investigations, including genomic surveillance, should also be conducted in the eastern DRC where CBSD is confirmed to know if CRND is found in conjunction with CBSD and to International Journal of Agriculture, Environment and Bioresearch Vol. 4, No. 06; 2019","PeriodicalId":364314,"journal":{"name":"International Journal of Agriculture, Environment and Bioresearch","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":"{\"title\":\"ASSESSING THE SEVERITY AND THE INCIDENCE OF CASSAVA ROOT NECROSIS DISEASE (CRND) IN WESTERN DEMOCRATIC REPUBLIC OF CONGO\",\"authors\":\"Bakelana Zeyimo, J. Pita, Mwangu Kuhima, Tevo Ndomateso, Mayanza Kingolo, Betezi Makuka, Tuwizana Nsimba, Mukendi Tshizembe, Tshiamala Ngeleka, Mahungu Nzola Meso, M. Godefroid, L. Munseki, T. Kanana, K. Mbuyi\",\"doi\":\"10.35410/ijaeb.2019.4477\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Cassava is the staple food in the Democratic Republic of Congo (DRC) where both the roots and leaves are consumed. This crop is susceptible to several viral diseases, including Cassava Mosaic Disease(CMD) and Cassava Brown Streak Disease(CBSD) in eastern DRC. Following earlier studies that show root necrosis occurring in western DR Care not due to CBSD but to Cassava Root Necrosis Disease (CRND), an exploratory survey was conducted in western DRC from 2016 to 2017 in order to determine the distribution, the severity and the incidence of this disease (previously known as CBSD-like disease). NGS ( Next Generation Sequencing) results confirmed all the previous negative results obtained using PCR and CBSV primers. This suggests that microorganisms such as bacteria or fungi could be responsible for cassava root necrosis in western DRC and is not CBSD as predicted. Five provinces (Bas-Congo, Kinshasa, Bandundu, Equateur and Kasai-Oriental) were surveyed and data were collected according to the harmonized protocols adopted by countries within the West African Virus Epidemiology (WAVE) project. Statistical tests (ANOVA) performed on our data showed that CRND severity did not vary significantly among the provinces of Kinshasa, Bandundu and Bas-Congo which are the areas most affected by the disease. Bas-Congo and Kinshasa provinces presented the highest maximum disease severity (score 3 and 5 respectively), while Equateur province had the lowest disease severity score. Equateur province also had the highest percentage of healthy plants and few plants presented mild symptoms. The overall average of cassava root necrosis severity in western DRC ranged around 1.88 ± 0.08, an approximate score of 2. The overall mean incidence of CRND in western DRC was 22.24 ± 2.4% but reached 100% in localities considered as hotspots (Lukuakua in Bas-Congo and Nguma in Plateau des Batékés). The behaviour of cassava varieties against CRND is similar with CBSD in East Africa, most of improved varieties and landraces are susceptible to both diseases. Correlation analyses showed a positive correlation (r = 0.6940) between severity and incidence of CRND. Therefore, Bas-Congo province is the most affected province, while the province of Equateur is the least affected province in western DRC. Further investigations, including genomic surveillance, should also be conducted in the eastern DRC where CBSD is confirmed to know if CRND is found in conjunction with CBSD and to International Journal of Agriculture, Environment and Bioresearch Vol. 4, No. 06; 2019\",\"PeriodicalId\":364314,\"journal\":{\"name\":\"International Journal of Agriculture, Environment and Bioresearch\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":0.0000,\"publicationDate\":\"1900-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"International Journal of Agriculture, Environment and Bioresearch\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.35410/ijaeb.2019.4477\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"International Journal of Agriculture, Environment and Bioresearch","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.35410/ijaeb.2019.4477","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 1

摘要

木薯是刚果民主共和国(DRC)的主食,其根和叶都被食用。这种作物易患几种病毒性疾病,包括刚果民主共和国东部的木薯花叶病(CMD)和木薯褐条病(CBSD)。早期的研究表明,西部刚果民主共和国的根坏死不是由CBSD引起的,而是由木薯根坏死病(CRND)引起的。随后,2016年至2017年在刚果民主共和国西部进行了一项探索性调查,以确定这种疾病(以前称为CBSD样疾病)的分布、严重程度和发病率。NGS (Next Generation Sequencing)结果证实了之前使用PCR和CBSV引物获得的所有阴性结果。这表明细菌或真菌等微生物可能是导致刚果民主共和国西部木薯根坏死的原因,而不是预测的CBSD。对五个省(下刚果省、金沙萨省、班顿杜省、赤道省和东开赛省)进行了调查,并根据西非病毒流行病学项目内各国通过的统一议定书收集了数据。对我们的数据进行的统计检验(ANOVA)显示,CRND严重程度在受该病影响最严重的金沙萨省、班顿杜省和下刚果省之间没有显著差异。下刚果省和金沙萨省的疾病严重程度最高(分别为3分和5分),而赤道省的疾病严重程度最低。赤道省的健康植物比例也最高,很少有植物出现轻微症状。刚果民主共和国西部木薯根坏死严重程度的总体平均值为1.88±0.08,约为2分。CRND在刚果民主共和国西部的总体平均发病率为22.24±2.4%,但在被认为是热点的地区(下刚果的Lukuakua和高原的Nguma)达到100%。在东非,木薯品种对CRND的行为与CBSD相似,大多数改良品种和地方品种对这两种疾病都敏感。相关分析显示,严重程度与CRND发生率呈正相关(r = 0.6940)。因此,下刚果省是受影响最严重的省份,而赤道省是刚果民主共和国西部受影响最小的省份。还应在刚果民主共和国东部进行进一步调查,包括基因组监测,在那里确认CBSD,以了解是否与CBSD一起发现CRND,并向《国际农业、环境和生物研究杂志》第4卷,第06期进行调查;2019
本文章由计算机程序翻译,如有差异,请以英文原文为准。
ASSESSING THE SEVERITY AND THE INCIDENCE OF CASSAVA ROOT NECROSIS DISEASE (CRND) IN WESTERN DEMOCRATIC REPUBLIC OF CONGO
Cassava is the staple food in the Democratic Republic of Congo (DRC) where both the roots and leaves are consumed. This crop is susceptible to several viral diseases, including Cassava Mosaic Disease(CMD) and Cassava Brown Streak Disease(CBSD) in eastern DRC. Following earlier studies that show root necrosis occurring in western DR Care not due to CBSD but to Cassava Root Necrosis Disease (CRND), an exploratory survey was conducted in western DRC from 2016 to 2017 in order to determine the distribution, the severity and the incidence of this disease (previously known as CBSD-like disease). NGS ( Next Generation Sequencing) results confirmed all the previous negative results obtained using PCR and CBSV primers. This suggests that microorganisms such as bacteria or fungi could be responsible for cassava root necrosis in western DRC and is not CBSD as predicted. Five provinces (Bas-Congo, Kinshasa, Bandundu, Equateur and Kasai-Oriental) were surveyed and data were collected according to the harmonized protocols adopted by countries within the West African Virus Epidemiology (WAVE) project. Statistical tests (ANOVA) performed on our data showed that CRND severity did not vary significantly among the provinces of Kinshasa, Bandundu and Bas-Congo which are the areas most affected by the disease. Bas-Congo and Kinshasa provinces presented the highest maximum disease severity (score 3 and 5 respectively), while Equateur province had the lowest disease severity score. Equateur province also had the highest percentage of healthy plants and few plants presented mild symptoms. The overall average of cassava root necrosis severity in western DRC ranged around 1.88 ± 0.08, an approximate score of 2. The overall mean incidence of CRND in western DRC was 22.24 ± 2.4% but reached 100% in localities considered as hotspots (Lukuakua in Bas-Congo and Nguma in Plateau des Batékés). The behaviour of cassava varieties against CRND is similar with CBSD in East Africa, most of improved varieties and landraces are susceptible to both diseases. Correlation analyses showed a positive correlation (r = 0.6940) between severity and incidence of CRND. Therefore, Bas-Congo province is the most affected province, while the province of Equateur is the least affected province in western DRC. Further investigations, including genomic surveillance, should also be conducted in the eastern DRC where CBSD is confirmed to know if CRND is found in conjunction with CBSD and to International Journal of Agriculture, Environment and Bioresearch Vol. 4, No. 06; 2019
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信