Lan Lin, Kewei Chen, J. Valla, Jiping He, E. Reiman, J. Galons, B. Hauss-Wegrzyniak, G. Alexander
{"title":"C57BL/6J小鼠脑MRI模板及图谱工具箱","authors":"Lan Lin, Kewei Chen, J. Valla, Jiping He, E. Reiman, J. Galons, B. Hauss-Wegrzyniak, G. Alexander","doi":"10.1109/CNE.2005.1419537","DOIUrl":null,"url":null,"abstract":"In order to compare brain-imaging measurements from different subjects, brain-mapping algorithms are commonly used to register individual brain onto a standardized brain atlas. In this study, SPM99 was used to linearly and nonlinearly coregister a spatially standardized T2-weighted template of C57BL/6J to the atlas by Paxinos and Franklin (2001), local accuracy of between atlas and template was evaluated, and a toolbox was developed. This study provides a foundation for the region of interest analysis for mouse brain images","PeriodicalId":113815,"journal":{"name":"Conference Proceedings. 2nd International IEEE EMBS Conference on Neural Engineering, 2005.","volume":"53 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2005-03-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"3","resultStr":"{\"title\":\"MRI Template and Atlas Toolbox for the C57BL/6J Mouse Brain\",\"authors\":\"Lan Lin, Kewei Chen, J. Valla, Jiping He, E. Reiman, J. Galons, B. Hauss-Wegrzyniak, G. Alexander\",\"doi\":\"10.1109/CNE.2005.1419537\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"In order to compare brain-imaging measurements from different subjects, brain-mapping algorithms are commonly used to register individual brain onto a standardized brain atlas. In this study, SPM99 was used to linearly and nonlinearly coregister a spatially standardized T2-weighted template of C57BL/6J to the atlas by Paxinos and Franklin (2001), local accuracy of between atlas and template was evaluated, and a toolbox was developed. This study provides a foundation for the region of interest analysis for mouse brain images\",\"PeriodicalId\":113815,\"journal\":{\"name\":\"Conference Proceedings. 2nd International IEEE EMBS Conference on Neural Engineering, 2005.\",\"volume\":\"53 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2005-03-16\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"3\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Conference Proceedings. 2nd International IEEE EMBS Conference on Neural Engineering, 2005.\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1109/CNE.2005.1419537\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Conference Proceedings. 2nd International IEEE EMBS Conference on Neural Engineering, 2005.","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/CNE.2005.1419537","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
MRI Template and Atlas Toolbox for the C57BL/6J Mouse Brain
In order to compare brain-imaging measurements from different subjects, brain-mapping algorithms are commonly used to register individual brain onto a standardized brain atlas. In this study, SPM99 was used to linearly and nonlinearly coregister a spatially standardized T2-weighted template of C57BL/6J to the atlas by Paxinos and Franklin (2001), local accuracy of between atlas and template was evaluated, and a toolbox was developed. This study provides a foundation for the region of interest analysis for mouse brain images