基于通用表达式的TV-GD光声成像内环展开方案

Jiasen Huang, Junyan Ren, Jun Xu, Yuanyuan Wang
{"title":"基于通用表达式的TV-GD光声成像内环展开方案","authors":"Jiasen Huang, Junyan Ren, Jun Xu, Yuanyuan Wang","doi":"10.1109/BioCAS.2014.6981662","DOIUrl":null,"url":null,"abstract":"Although the total variation based gradient descent (TV-GD) algorithm has revealed a good performance for photoacoustic imaging (PAI), fast or real-time imaging remains a challenge. In this paper, the data dependencies that exist in the TV-GD algorithm were exploited, and a general expression was then for the first time derived to unroll the inner loop that occupied the majority of the entire running time of the algorithm. All the terms consisting of the measurement matrices or the under-sampled datasets were then extracted and preprocessed rather than being calculated along with reconstruction. For implementation, we accessed the JACKET toolbox to parallelize the execution of the matrix-vector multiplications and the vector additions generated by the general expression itself. The under-sampled dataset with 30, 60, 90 and 120 projections were adopted to reconstruct a 128×128 Shepp-Logan Phantom. The simulation results revealed a minimum reconstruction time of 0.64s in the case of the 60-view data, and a maximum speedup of 69X from the 120-view dataset.","PeriodicalId":414575,"journal":{"name":"2014 IEEE Biomedical Circuits and Systems Conference (BioCAS) Proceedings","volume":"6 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2014-12-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"General expression based inner loop unrolling scheme for TV-GD algorithm adopted in photoacoustic imaging\",\"authors\":\"Jiasen Huang, Junyan Ren, Jun Xu, Yuanyuan Wang\",\"doi\":\"10.1109/BioCAS.2014.6981662\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Although the total variation based gradient descent (TV-GD) algorithm has revealed a good performance for photoacoustic imaging (PAI), fast or real-time imaging remains a challenge. In this paper, the data dependencies that exist in the TV-GD algorithm were exploited, and a general expression was then for the first time derived to unroll the inner loop that occupied the majority of the entire running time of the algorithm. All the terms consisting of the measurement matrices or the under-sampled datasets were then extracted and preprocessed rather than being calculated along with reconstruction. For implementation, we accessed the JACKET toolbox to parallelize the execution of the matrix-vector multiplications and the vector additions generated by the general expression itself. The under-sampled dataset with 30, 60, 90 and 120 projections were adopted to reconstruct a 128×128 Shepp-Logan Phantom. The simulation results revealed a minimum reconstruction time of 0.64s in the case of the 60-view data, and a maximum speedup of 69X from the 120-view dataset.\",\"PeriodicalId\":414575,\"journal\":{\"name\":\"2014 IEEE Biomedical Circuits and Systems Conference (BioCAS) Proceedings\",\"volume\":\"6 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2014-12-11\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"2014 IEEE Biomedical Circuits and Systems Conference (BioCAS) Proceedings\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1109/BioCAS.2014.6981662\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"2014 IEEE Biomedical Circuits and Systems Conference (BioCAS) Proceedings","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/BioCAS.2014.6981662","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

摘要

尽管基于总变分的梯度下降(TV-GD)算法在光声成像(PAI)中表现出了良好的性能,但快速或实时成像仍然是一个挑战。本文利用TV-GD算法中存在的数据依赖关系,首次导出了一个通用表达式来展开占据整个算法运行时间大部分的内循环。然后提取由测量矩阵或欠采样数据集组成的所有项并进行预处理,而不是随重建一起计算。为了实现,我们访问了JACKET工具箱来并行执行矩阵-向量乘法和由通用表达式本身生成的向量加法。采用30、60、90和120个投影的欠采样数据集重建128×128谢普-洛根幻影。仿真结果显示,对于60视图数据,最小重建时间为0.64s,对于120视图数据集,最大加速时间为69X。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
General expression based inner loop unrolling scheme for TV-GD algorithm adopted in photoacoustic imaging
Although the total variation based gradient descent (TV-GD) algorithm has revealed a good performance for photoacoustic imaging (PAI), fast or real-time imaging remains a challenge. In this paper, the data dependencies that exist in the TV-GD algorithm were exploited, and a general expression was then for the first time derived to unroll the inner loop that occupied the majority of the entire running time of the algorithm. All the terms consisting of the measurement matrices or the under-sampled datasets were then extracted and preprocessed rather than being calculated along with reconstruction. For implementation, we accessed the JACKET toolbox to parallelize the execution of the matrix-vector multiplications and the vector additions generated by the general expression itself. The under-sampled dataset with 30, 60, 90 and 120 projections were adopted to reconstruct a 128×128 Shepp-Logan Phantom. The simulation results revealed a minimum reconstruction time of 0.64s in the case of the 60-view data, and a maximum speedup of 69X from the 120-view dataset.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信