代谢组学数据可视化分析系统

Philip Livengood, Ross Maciejewski, Wei Chen, D. Ebert
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引用次数: 6

摘要

在分析代谢组学数据时,癌症护理研究人员正在寻找已知健康样本和不健康样本之间的差异。通过分析和理解这些差异,研究人员希望确定癌症生物标志物。在这项工作中,我们提出了一个新的系统,可以对通过二维气相色谱-质谱(GCxGC-MS)获得的代谢组学数据进行交互式比较可视化和分析。我们的系统允许用户生成和交互式探索多个GCxGC-MS数据集的可视化,从而允许用户实时发现差异和特征。我们的系统以平均值和标准偏差计算的形式提供统计支持,以帮助用户识别样本组之间有意义的差异。我们将这些与多种形式的链接可视化相结合,以便为研究人员提供一个强大的GCxGC-MS探索和生物标志物发现的新工具。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A visual analysis system for metabolomics data
When analyzing metabolomics data, cancer care researchers are searching for differences between known healthy samples and unhealthy samples. By analyzing and understanding these differences, researchers hope to identify cancer biomarkers. In this work we present a novel system that enables interactive comparative visualization and analysis of metabolomics data obtained by two-dimensional gas chromatography-mass spectrome-try (GCxGC-MS). Our system allows the user to produce, and interactively explore, visualizations of multiple GCxGC-MS data sets, thereby allowing a user to discover differences and features in real time. Our system provides statistical support in the form of mean and standard deviation calculations to aid users in identifying meaningful differences between sample groups. We combine these with multiform, linked visualizations in order to provide researchers with a powerful new tool for GCxGC-MS exploration and bio-marker discovery.
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