计算核磁共振辅助结构解析中的机器学习

Iván Cortés, Cristina Cuadrado, A. Hernández Daranas, Ariel M. Sarotti
{"title":"计算核磁共振辅助结构解析中的机器学习","authors":"Iván Cortés, Cristina Cuadrado, A. Hernández Daranas, Ariel M. Sarotti","doi":"10.3389/fntpr.2023.1122426","DOIUrl":null,"url":null,"abstract":"Structure elucidation is a stage of paramount importance in the discovery of novel compounds because molecular structure determines their physical, chemical and biological properties. Computational prediction of spectroscopic data, mainly NMR, has become a widely used tool to help in such tasks due to its increasing easiness and reliability. However, despite the continuous increment in CPU calculation power, classical quantum mechanics simulations still require a lot of effort. Accordingly, simulations of large or conformationally complex molecules are impractical. In this context, a growing number of research groups have explored the capabilities of machine learning (ML) algorithms in computational NMR prediction. In parallel, important advances have been made in the development of machine learning-inspired methods to correlate the experimental and calculated NMR data to facilitate the structural elucidation process. Here, we have selected some essential papers to review this research area and propose conclusions and future perspectives for the field.","PeriodicalId":159634,"journal":{"name":"Frontiers in Natural Products","volume":"1 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2023-01-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"4","resultStr":"{\"title\":\"Machine learning in computational NMR-aided structural elucidation\",\"authors\":\"Iván Cortés, Cristina Cuadrado, A. Hernández Daranas, Ariel M. Sarotti\",\"doi\":\"10.3389/fntpr.2023.1122426\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Structure elucidation is a stage of paramount importance in the discovery of novel compounds because molecular structure determines their physical, chemical and biological properties. Computational prediction of spectroscopic data, mainly NMR, has become a widely used tool to help in such tasks due to its increasing easiness and reliability. However, despite the continuous increment in CPU calculation power, classical quantum mechanics simulations still require a lot of effort. Accordingly, simulations of large or conformationally complex molecules are impractical. In this context, a growing number of research groups have explored the capabilities of machine learning (ML) algorithms in computational NMR prediction. In parallel, important advances have been made in the development of machine learning-inspired methods to correlate the experimental and calculated NMR data to facilitate the structural elucidation process. Here, we have selected some essential papers to review this research area and propose conclusions and future perspectives for the field.\",\"PeriodicalId\":159634,\"journal\":{\"name\":\"Frontiers in Natural Products\",\"volume\":\"1 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2023-01-27\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"4\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Frontiers in Natural Products\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.3389/fntpr.2023.1122426\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Frontiers in Natural Products","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.3389/fntpr.2023.1122426","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 4

摘要

结构解析是发现新化合物的一个至关重要的阶段,因为分子结构决定了它们的物理、化学和生物性质。光谱数据的计算预测,主要是核磁共振,由于其越来越简单和可靠,已成为一种广泛使用的工具,以帮助完成这些任务。然而,尽管CPU计算能力不断提高,经典量子力学模拟仍然需要大量的努力。因此,模拟大型或构象复杂的分子是不切实际的。在这种背景下,越来越多的研究小组已经探索了机器学习(ML)算法在计算核磁共振预测中的能力。与此同时,在机器学习启发的方法的发展方面取得了重要进展,这些方法将实验和计算的核磁共振数据联系起来,以促进结构解析过程。在这里,我们选择了一些重要的论文来回顾这一研究领域,并提出结论和未来的展望。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Machine learning in computational NMR-aided structural elucidation
Structure elucidation is a stage of paramount importance in the discovery of novel compounds because molecular structure determines their physical, chemical and biological properties. Computational prediction of spectroscopic data, mainly NMR, has become a widely used tool to help in such tasks due to its increasing easiness and reliability. However, despite the continuous increment in CPU calculation power, classical quantum mechanics simulations still require a lot of effort. Accordingly, simulations of large or conformationally complex molecules are impractical. In this context, a growing number of research groups have explored the capabilities of machine learning (ML) algorithms in computational NMR prediction. In parallel, important advances have been made in the development of machine learning-inspired methods to correlate the experimental and calculated NMR data to facilitate the structural elucidation process. Here, we have selected some essential papers to review this research area and propose conclusions and future perspectives for the field.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信