荧光分子光谱特征提高了头颈部标本中肿瘤的识别能力。

Frontiers in Medical Technology Pub Date : 2023-02-15 eCollection Date: 2023-01-01 DOI:10.3389/fmedt.2023.1009638
Yao Chen, Samuel S Streeter, Brady Hunt, Hira S Sardar, Jason R Gunn, Laura J Tafe, Joseph A Paydarfar, Brian W Pogue, Keith D Paulsen, Kimberley S Samkoe
{"title":"荧光分子光谱特征提高了头颈部标本中肿瘤的识别能力。","authors":"Yao Chen, Samuel S Streeter, Brady Hunt, Hira S Sardar, Jason R Gunn, Laura J Tafe, Joseph A Paydarfar, Brian W Pogue, Keith D Paulsen, Kimberley S Samkoe","doi":"10.3389/fmedt.2023.1009638","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>Fluorescence molecular imaging using ABY-029, an epidermal growth factor receptor (EGFR)-targeted, synthetic Affibody peptide labeled with a near-infrared fluorophore, is under investigation for surgical guidance during head and neck squamous cell carcinoma (HNSCC) resection. However, tumor-to-normal tissue contrast is confounded by intrinsic physiological limitations of heterogeneous EGFR expression and non-specific agent uptake.</p><p><strong>Objective: </strong>In this preliminary study, radiomic analysis was applied to optical ABY-029 fluorescence image data for HNSCC tissue classification through an approach termed \"optomics.\" Optomics was employed to improve tumor identification by leveraging textural pattern differences in EGFR expression conveyed by fluorescence. The study objective was to compare the performance of conventional fluorescence intensity thresholding and optomics for binary classification of malignant vs. non-malignant HNSCC tissues.</p><p><strong>Materials and methods: </strong>Fluorescence image data collected through a Phase 0 clinical trial of ABY-029 involved a total of 20,073 sub-image patches (size of 1.8 × 1.8 mm<sup>2</sup>) extracted from 24 bread-loafed slices of HNSCC surgical resections originating from 12 patients who were stratified into three dose groups (30, 90, and 171 nanomoles). Each dose group was randomly partitioned on the specimen-level 75%/25% into training/testing sets, then all training and testing sets were aggregated. A total of 1,472 standardized radiomic features were extracted from each patch and evaluated by minimum redundancy maximum relevance feature selection, and 25 top-ranked features were used to train a support vector machine (SVM) classifier. Predictive performance of the SVM classifier was compared to fluorescence intensity thresholding for classifying testing set image patches with histologically confirmed malignancy status.</p><p><strong>Results: </strong>Optomics provided consistent improvement in prediction accuracy and false positive rate (FPR) and similar false negative rate (FNR) on all testing set slices, irrespective of dose, compared to fluorescence intensity thresholding (mean accuracies of 89% vs. 81%, <i>P </i>= 0.0072; mean FPRs of 12% vs. 21%, <i>P</i> = 0.0035; and mean FNRs of 13% vs. 17%, <i>P</i> = 0.35).</p><p><strong>Conclusions: </strong>Optomics outperformed conventional fluorescence intensity thresholding for tumor identification using sub-image patches as the unit of analysis. Optomics mitigate diagnostic uncertainties introduced through physiological variability, imaging agent dose, and inter-specimen biases of fluorescence molecular imaging by probing textural image information. This preliminary study provides a proof-of-concept that applying radiomics to fluorescence molecular imaging data offers a promising image analysis technique for cancer detection in fluorescence-guided surgery.</p>","PeriodicalId":12599,"journal":{"name":"Frontiers in Medical Technology","volume":"5 ","pages":"1009638"},"PeriodicalIF":0.0000,"publicationDate":"2023-02-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9975724/pdf/","citationCount":"0","resultStr":"{\"title\":\"Fluorescence molecular optomic signatures improve identification of tumors in head and neck specimens.\",\"authors\":\"Yao Chen, Samuel S Streeter, Brady Hunt, Hira S Sardar, Jason R Gunn, Laura J Tafe, Joseph A Paydarfar, Brian W Pogue, Keith D Paulsen, Kimberley S Samkoe\",\"doi\":\"10.3389/fmedt.2023.1009638\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Background: </strong>Fluorescence molecular imaging using ABY-029, an epidermal growth factor receptor (EGFR)-targeted, synthetic Affibody peptide labeled with a near-infrared fluorophore, is under investigation for surgical guidance during head and neck squamous cell carcinoma (HNSCC) resection. However, tumor-to-normal tissue contrast is confounded by intrinsic physiological limitations of heterogeneous EGFR expression and non-specific agent uptake.</p><p><strong>Objective: </strong>In this preliminary study, radiomic analysis was applied to optical ABY-029 fluorescence image data for HNSCC tissue classification through an approach termed \\\"optomics.\\\" Optomics was employed to improve tumor identification by leveraging textural pattern differences in EGFR expression conveyed by fluorescence. The study objective was to compare the performance of conventional fluorescence intensity thresholding and optomics for binary classification of malignant vs. non-malignant HNSCC tissues.</p><p><strong>Materials and methods: </strong>Fluorescence image data collected through a Phase 0 clinical trial of ABY-029 involved a total of 20,073 sub-image patches (size of 1.8 × 1.8 mm<sup>2</sup>) extracted from 24 bread-loafed slices of HNSCC surgical resections originating from 12 patients who were stratified into three dose groups (30, 90, and 171 nanomoles). Each dose group was randomly partitioned on the specimen-level 75%/25% into training/testing sets, then all training and testing sets were aggregated. A total of 1,472 standardized radiomic features were extracted from each patch and evaluated by minimum redundancy maximum relevance feature selection, and 25 top-ranked features were used to train a support vector machine (SVM) classifier. Predictive performance of the SVM classifier was compared to fluorescence intensity thresholding for classifying testing set image patches with histologically confirmed malignancy status.</p><p><strong>Results: </strong>Optomics provided consistent improvement in prediction accuracy and false positive rate (FPR) and similar false negative rate (FNR) on all testing set slices, irrespective of dose, compared to fluorescence intensity thresholding (mean accuracies of 89% vs. 81%, <i>P </i>= 0.0072; mean FPRs of 12% vs. 21%, <i>P</i> = 0.0035; and mean FNRs of 13% vs. 17%, <i>P</i> = 0.35).</p><p><strong>Conclusions: </strong>Optomics outperformed conventional fluorescence intensity thresholding for tumor identification using sub-image patches as the unit of analysis. Optomics mitigate diagnostic uncertainties introduced through physiological variability, imaging agent dose, and inter-specimen biases of fluorescence molecular imaging by probing textural image information. This preliminary study provides a proof-of-concept that applying radiomics to fluorescence molecular imaging data offers a promising image analysis technique for cancer detection in fluorescence-guided surgery.</p>\",\"PeriodicalId\":12599,\"journal\":{\"name\":\"Frontiers in Medical Technology\",\"volume\":\"5 \",\"pages\":\"1009638\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2023-02-15\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9975724/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Frontiers in Medical Technology\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.3389/fmedt.2023.1009638\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2023/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Frontiers in Medical Technology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.3389/fmedt.2023.1009638","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2023/1/1 0:00:00","PubModel":"eCollection","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

摘要

背景:ABY-029是一种以表皮生长因子受体(EGFR)为靶点、用近红外荧光团标记的合成Affibody肽,目前正在研究使用ABY-029进行荧光分子成像,为头颈部鳞状细胞癌(HNSCC)切除术提供手术指导。然而,肿瘤与正常组织的对比因表皮生长因子受体的异质性表达和非特异性药剂吸收等内在生理限制而受到干扰:在这项初步研究中,通过一种称为 "光学组学 "的方法,将放射组学分析应用于 HNSCC 组织分类的 ABY-029 荧光光学图像数据。通过利用荧光表达的表皮生长因子受体(EGFR)表达的纹理模式差异,光学组学被用于提高肿瘤识别率。研究目的是比较传统荧光强度阈值法和光组学在恶性与非恶性 HNSCC 组织二元分类中的性能:在ABY-029的0期临床试验中收集的荧光图像数据共涉及20,073个子图像片段(大小为1.8 × 1.8平方毫米),这些片段是从24张HNSCC手术切除的面包片中提取的,这些患者来自12名患者,他们被分为三个剂量组(30、90和171纳摩尔)。每个剂量组在标本水平上以 75%/25% 的比例随机分为训练集/测试集,然后将所有训练集和测试集汇总。通过最小冗余度最大相关性特征选择法,从每个补片中提取了共 1472 个标准化放射体特征并进行了评估,排名靠前的 25 个特征被用于训练支持向量机(SVM)分类器。将 SVM 分类器的预测性能与荧光强度阈值法进行比较,以对测试集图像斑块进行组织学证实的恶性肿瘤状态分类:结果:与荧光强度阈值法相比,Optomics 在所有测试集切片上(无论剂量大小)的预测准确率和假阳性率 (FPR) 均有持续改善,假阴性率 (FNR) 也有类似改善(平均准确率为 89% vs. 81%,P = 0.0072;平均 FPR 为 12% vs. 21%,P = 0.0035;平均 FNR 为 13% vs. 17%,P = 0.35):结论:在使用子图像斑块作为分析单位进行肿瘤识别时,光学组学优于传统的荧光强度阈值法。光学组学通过探究图像纹理信息,减轻了荧光分子成像因生理变异、成像剂剂量和样本间偏差而带来的诊断不确定性。这项初步研究提供了一个概念验证,即将放射组学应用于荧光分子成像数据为荧光引导手术中的癌症检测提供了一种前景广阔的图像分析技术。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Fluorescence molecular optomic signatures improve identification of tumors in head and neck specimens.

Fluorescence molecular optomic signatures improve identification of tumors in head and neck specimens.

Fluorescence molecular optomic signatures improve identification of tumors in head and neck specimens.

Fluorescence molecular optomic signatures improve identification of tumors in head and neck specimens.

Background: Fluorescence molecular imaging using ABY-029, an epidermal growth factor receptor (EGFR)-targeted, synthetic Affibody peptide labeled with a near-infrared fluorophore, is under investigation for surgical guidance during head and neck squamous cell carcinoma (HNSCC) resection. However, tumor-to-normal tissue contrast is confounded by intrinsic physiological limitations of heterogeneous EGFR expression and non-specific agent uptake.

Objective: In this preliminary study, radiomic analysis was applied to optical ABY-029 fluorescence image data for HNSCC tissue classification through an approach termed "optomics." Optomics was employed to improve tumor identification by leveraging textural pattern differences in EGFR expression conveyed by fluorescence. The study objective was to compare the performance of conventional fluorescence intensity thresholding and optomics for binary classification of malignant vs. non-malignant HNSCC tissues.

Materials and methods: Fluorescence image data collected through a Phase 0 clinical trial of ABY-029 involved a total of 20,073 sub-image patches (size of 1.8 × 1.8 mm2) extracted from 24 bread-loafed slices of HNSCC surgical resections originating from 12 patients who were stratified into three dose groups (30, 90, and 171 nanomoles). Each dose group was randomly partitioned on the specimen-level 75%/25% into training/testing sets, then all training and testing sets were aggregated. A total of 1,472 standardized radiomic features were extracted from each patch and evaluated by minimum redundancy maximum relevance feature selection, and 25 top-ranked features were used to train a support vector machine (SVM) classifier. Predictive performance of the SVM classifier was compared to fluorescence intensity thresholding for classifying testing set image patches with histologically confirmed malignancy status.

Results: Optomics provided consistent improvement in prediction accuracy and false positive rate (FPR) and similar false negative rate (FNR) on all testing set slices, irrespective of dose, compared to fluorescence intensity thresholding (mean accuracies of 89% vs. 81%, P = 0.0072; mean FPRs of 12% vs. 21%, P = 0.0035; and mean FNRs of 13% vs. 17%, P = 0.35).

Conclusions: Optomics outperformed conventional fluorescence intensity thresholding for tumor identification using sub-image patches as the unit of analysis. Optomics mitigate diagnostic uncertainties introduced through physiological variability, imaging agent dose, and inter-specimen biases of fluorescence molecular imaging by probing textural image information. This preliminary study provides a proof-of-concept that applying radiomics to fluorescence molecular imaging data offers a promising image analysis technique for cancer detection in fluorescence-guided surgery.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信